Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX2P50458 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 RNU1-108P-201ENST00000362556 161 ntBASIC3.78□□□□□ -1.8
LHX2P50458 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LHX2P50458 MIR708-201ENST00000390708 88 ntBASIC3.78□□□□□ -1.8
LHX2P50458 MIR1179-201ENST00000408703 91 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.78□□□□□ -1.8
LHX2P50458 AC009302.1-201ENST00000417147 390 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX2P50458 PDSS1P1-201ENST00000422953 1114 ntBASIC3.78□□□□□ -1.8
LHX2P50458 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AL445528.1-201ENST00000426330 420 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.78□□□□□ -1.8
LHX2P50458 MRPS33P4-201ENST00000434892 317 ntBASIC3.78□□□□□ -1.8
LHX2P50458 RPL23AP46-201ENST00000438548 490 ntBASIC3.78□□□□□ -1.8
LHX2P50458 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX2P50458 PSMC1P13-201ENST00000458195 985 ntBASIC3.78□□□□□ -1.8
LHX2P50458 RNA5SP246-201ENST00000458909 119 ntBASIC3.78□□□□□ -1.8
LHX2P50458 RPL5P30-201ENST00000465511 891 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.78□□□□□ -1.8
LHX2P50458 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.78□□□□□ -1.8
LHX2P50458 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.78□□□□□ -1.8
LHX2P50458 SS18L2P2-201ENST00000583960 235 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.78□□□□□ -1.8
LHX2P50458 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.78□□□□□ -1.8
LHX2P50458 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.78□□□□□ -1.8
LHX2P50458 AC084036.1-201ENST00000609190 508 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AC015813.4-201ENST00000610469 179 ntBASIC3.78□□□□□ -1.8
LHX2P50458 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 ZYXP1-201ENST00000617638 118 ntBASIC3.78□□□□□ -1.8
LHX2P50458 AC015908.5-201ENST00000623289 343 ntBASIC3.78□□□□□ -1.8
LHX2P50458 BMS1P21-201ENST00000634565 365 ntBASIC3.78□□□□□ -1.8
LHX2P50458 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LHX2P50458 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LHX2P50458 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX2P50458 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX2P50458 AC105074.1-201ENST00000623380 3095 ntBASIC3.78□□□□□ -1.8
LHX2P50458 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
LHX2P50458 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LHX2P50458 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.77□□□□□ -1.81
LHX2P50458 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LHX2P50458 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 OR13C3-201ENST00000374781 1108 ntBASIC3.77□□□□□ -1.81
LHX2P50458 RNU1-13P-201ENST00000384499 162 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AL589655.1-201ENST00000405398 482 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AL356967.1-201ENST00000406305 431 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.77□□□□□ -1.81
LHX2P50458 AC073335.1-201ENST00000427776 363 ntBASIC3.77□□□□□ -1.81
LHX2P50458 MRPL50P1-201ENST00000431951 384 ntBASIC3.77□□□□□ -1.81
LHX2P50458 OR4C10P-201ENST00000434991 931 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX2P50458 AC133473.1-201ENST00000455173 299 ntBASIC3.77□□□□□ -1.81
LHX2P50458 MTND6P32-201ENST00000457611 483 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX2P50458 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.77□□□□□ -1.81
LHX2P50458 AC025181.1-201ENST00000477507 416 ntBASIC3.77□□□□□ -1.81
LHX2P50458 STRADBP1-201ENST00000478954 1281 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AL161747.1-201ENST00000480068 358 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AF213884.1-201ENST00000488102 463 ntBASIC3.77□□□□□ -1.81
LHX2P50458 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.77□□□□□ -1.81
LHX2P50458 AC108145.1-201ENST00000503770 153 ntBASIC3.77□□□□□ -1.81
LHX2P50458 BNIP3P41-201ENST00000503774 571 ntBASIC3.77□□□□□ -1.81
LHX2P50458 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX2P50458 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.77□□□□□ -1.81
LHX2P50458 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.77□□□□□ -1.81
LHX2P50458 MTND2P31-201ENST00000512602 616 ntBASIC3.77□□□□□ -1.81
LHX2P50458 NDUFB4P12-201ENST00000513465 390 ntBASIC3.77□□□□□ -1.81
LHX2P50458 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.77□□□□□ -1.81
LHX2P50458 MTCYBP19-201ENST00000517463 1124 ntBASIC3.77□□□□□ -1.81
LHX2P50458 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.77□□□□□ -1.81
LHX2P50458 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.77□□□□□ -1.81
LHX2P50458 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.77□□□□□ -1.81
LHX2P50458 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX2P50458 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX2P50458 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.77□□□□□ -1.81
LHX2P50458 MIR3160-1-201ENST00000577972 85 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AC090312.1-201ENST00000580637 348 ntBASIC3.77□□□□□ -1.81
LHX2P50458 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.77□□□□□ -1.81
LHX2P50458 AC010857.1-201ENST00000606398 594 ntBASIC3.77□□□□□ -1.81
LHX2P50458 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.77□□□□□ -1.81
LHX2P50458 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LHX2P50458 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LHX2P50458 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LHX2P50458 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX2P50458 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LHX2P50458 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms