Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSNK1A1P48729 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.83□□□□□ -1.8
CSNK1A1P48729 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CSNK1A1P48729 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 MTCO1P8-201ENST00000416914 1523 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1A1P48729 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1A1P48729 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 RNA5SP52-201ENST00000362448 134 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 RNU6-666P-201ENST00000363499 107 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 SNORD66.1-201ENST00000391230 76 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC004552.1-201ENST00000419089 348 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 DNAJC19P7-201ENST00000428811 344 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC068287.1-201ENST00000430283 295 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 RPL23AP52-201ENST00000439311 478 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AL157827.1-201ENST00000447622 132 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 RNU6-775P-201ENST00000459318 96 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 RPS26P3-201ENST00000470205 348 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC090543.2-201ENST00000483963 348 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC004057.1-201ENST00000485827 348 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1A1P48729 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1A1P48729 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC021483.2-201ENST00000567415 758 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 OR1AB1P-201ENST00000585564 761 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 AL354984.3-201ENST00000604803 325 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 BX323046.1-201ENST00000610145 535 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC007546.1-201ENST00000619452 559 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 AC000123.2-201ENST00000623124 461 ntBASIC3.82□□□□□ -1.8
CSNK1A1P48729 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1A1P48729 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CSNK1A1P48729 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.82□□□□□ -1.8
CSNK1A1P48729 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 EIF2AP4-201ENST00000424793 1781 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK1A1P48729 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK1A1P48729 RN7SKP44-201ENST00000363602 316 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 ELOCP19-201ENST00000411919 318 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC013404.1-201ENST00000413068 249 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 RPS27AP7-201ENST00000422792 455 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 MAPRE1P3-201ENST00000435438 796 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 CEACAMP9-201ENST00000442990 513 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AL512326.1-201ENST00000443050 721 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 RPL23AP12-201ENST00000467573 473 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK1A1P48729 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC010476.1-201ENST00000519111 851 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC006064.5-201ENST00000541782 248 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC008083.2-201ENST00000546707 476 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 MTATP6P25-201ENST00000574491 261 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 SS18L2P2-201ENST00000583960 235 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AL049844.2-201ENST00000604280 628 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 HMGB1P51-201ENST00000605166 638 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC078899.5-201ENST00000612475 178 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 AC004825.2-201ENST00000616634 455 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK1A1P48729 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 CFTRP2-201ENST00000634304 199 ntBASIC3.81□□□□□ -1.8
CSNK1A1P48729 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
CSNK1A1P48729 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CSNK1A1P48729 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms