Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF4P48230 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TM4SF4P48230 USP9YP4-201ENST00000424401 1745 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 PHKBP1-201ENST00000450951 1951 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF4P48230 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 RNU4-51P-201ENST00000364206 140 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 RNU4-68P-201ENST00000364314 141 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 SNORA48.4-201ENST00000391089 134 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 RNA5SP44-201ENST00000410446 133 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 GPS2P1-201ENST00000411761 986 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF4P48230 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF4P48230 RPL19P16-201ENST00000433839 588 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF4P48230 AL589765.3-201ENST00000446084 462 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 MTND1P33-201ENST00000446251 917 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF4P48230 AL691482.1-201ENST00000453255 87 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 PTGES3P5-201ENST00000455109 434 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 SNORD11.1-201ENST00000459482 85 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF4P48230 AC118282.2-201ENST00000508739 374 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AC138832.1-201ENST00000522871 556 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 MTCO1P49-201ENST00000523429 802 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TM4SF4P48230 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.51□□□□□ -1.53
TM4SF4P48230 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.51□□□□□ -1.53
TM4SF4P48230 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.51□□□□□ -1.53
TM4SF4P48230 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF4P48230 MIR3158-1-201ENST00000583596 81 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF4P48230 AP001160.4-201ENST00000596971 382 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AL133338.2-201ENST00000604292 736 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AC096553.1-201ENST00000605169 829 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AL450336.1-201ENST00000605180 586 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF4P48230 AP000238.1-201ENST00000608759 426 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 AC234782.5-201ENST00000617723 324 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AC005618.4-201ENST00000625053 554 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.51□□□□□ -1.53
TM4SF4P48230 AC090897.3-201ENST00000636973 1157 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 AC125257.1-201ENST00000560400 2930 ntBASIC5.51□□□□□ -1.53
TM4SF4P48230 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF4P48230 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF4P48230 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TM4SF4P48230 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF4P48230 OR14L1P-202ENST00000641545 3009 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF4P48230 ZNF137P-201ENST00000456718 1920 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF4P48230 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 AL035079.1-201ENST00000405210 287 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 AL592310.1-201ENST00000414330 671 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 Z75741.2-201ENST00000417272 1167 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.5□□□□□ -1.53
TM4SF4P48230 AL590399.2-201ENST00000427536 309 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 HIGD1AP12-201ENST00000427832 281 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 EEF1A1P39-201ENST00000440791 250 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF4P48230 MTND4LP2-201ENST00000502312 285 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 RPL7L1P13-201ENST00000511702 739 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 RN7SKP265-201ENST00000516448 223 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.5□□□□□ -1.53
TM4SF4P48230 AP000827.1-201ENST00000527814 258 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.5□□□□□ -1.53
TM4SF4P48230 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.5□□□□□ -1.53
TM4SF4P48230 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 OR8R1P-201ENST00000543943 764 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 AC044913.1-201ENST00000557200 430 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.5□□□□□ -1.53
TM4SF4P48230 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.5□□□□□ -1.53
TM4SF4P48230 VN1R7P-201ENST00000619242 903 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.5□□□□□ -1.53
TM4SF4P48230 AC107027.3-201ENST00000565095 3473 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 TLK1P1-201ENST00000456760 2440 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF4P48230 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF4P48230 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF4P48230 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF4P48230 AL359955.1-201ENST00000455242 3275 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TM4SF4P48230 AL034370.1-201ENST00000397254 1590 ntBASIC5.5□□□□□ -1.53
TM4SF4P48230 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms