Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 MTCO3P15-201ENST00000526563 574 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC027544.3-201ENST00000535082 757 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 GSTP1P1-201ENST00000548078 319 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC004217.3-201ENST00000551552 878 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC068446.3-201ENST00000555285 382 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 RPL21P7-201ENST00000557463 483 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC079075.1-201ENST00000559543 878 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC017100.2-201ENST00000584628 355 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC011453.2-201ENST00000603737 729 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC104687.2-201ENST00000604442 342 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC010245.2-201ENST00000606908 1167 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC099676.1-201ENST00000608886 657 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AP000255.1-201ENST00000610276 676 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 RNA5SP440-201ENST00000612665 119 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 RPSAP73-201ENST00000614820 330 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC126175.1-201ENST00000617041 758 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC131238.1-201ENST00000617135 328 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC012414.7-202ENST00000622705 1090 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NKX2-1P43699 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.03□□□□□ -1.76
NKX2-1P43699 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 AL355852.1-201ENST00000454081 1771 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.03□□□□□ -1.76
NKX2-1P43699 AC000123.3-201ENST00000624029 4975 ntBASIC4.03□□□□□ -1.76
NKX2-1P43699 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NKX2-1P43699 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 RNU4-68P-201ENST00000364314 141 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 RN7SKP124-201ENST00000364730 341 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX2-1P43699 MIR600-201ENST00000385007 98 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 SNORD96B-201ENST00000386148 79 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 Y_RNA.578-201ENST00000390903 88 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 PRRC2CP1-201ENST00000404428 159 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 SNORA11.5-201ENST00000408163 128 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 U3.35-201ENST00000408405 208 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 SNORA77-201ENST00000408716 125 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 CEACAMP8-201ENST00000413902 580 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NKX2-1P43699 HMGB1P49-201ENST00000418882 569 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 KRR1P1-201ENST00000419430 803 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 E2F6P2-201ENST00000420708 748 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 RPL30P3-201ENST00000424262 333 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC079807.1-201ENST00000429993 481 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 FAM96AP1-201ENST00000430879 482 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AC004938.1-201ENST00000438468 308 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 RPS29P9-201ENST00000440360 171 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC004865.1-201ENST00000442276 1003 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.02□□□□□ -1.77
NKX2-1P43699 HMGB3P21-201ENST00000452483 547 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC092155.2-201ENST00000454675 477 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 RN7SL466P-201ENST00000497546 295 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 RPS4XP20-201ENST00000505751 772 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.02□□□□□ -1.77
NKX2-1P43699 RPL7L1P13-201ENST00000511702 739 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC021146.3-201ENST00000511911 260 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.02□□□□□ -1.77
NKX2-1P43699 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.02□□□□□ -1.77
NKX2-1P43699 RNU6-488P-201ENST00000515918 99 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 RN7SKP82-201ENST00000516786 223 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 Y_RNA.719-201ENST00000517156 106 ntBASIC4.02□□□□□ -1.77
NKX2-1P43699 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms