Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSR1P43307 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSR1P43307 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSR1P43307 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSR1P43307 MIR423-201ENST00000362201 94 ntBASIC4.63□□□□□ -1.67
SSR1P43307 RNA5SP307-201ENST00000362863 116 ntBASIC4.63□□□□□ -1.67
SSR1P43307 RNA5SP87-201ENST00000384155 118 ntBASIC4.63□□□□□ -1.67
SSR1P43307 RN7SKP216-201ENST00000411050 312 ntBASIC4.63□□□□□ -1.67
SSR1P43307 UQCRBP1-201ENST00000421129 336 ntBASIC4.63□□□□□ -1.67
SSR1P43307 AC006065.1-201ENST00000422539 802 ntBASIC4.63□□□□□ -1.67
SSR1P43307 RPL7AP25-201ENST00000423357 805 ntBASIC4.63□□□□□ -1.67
SSR1P43307 AL355994.1-201ENST00000424379 260 ntBASIC4.63□□□□□ -1.67
SSR1P43307 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSR1P43307 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.63□□□□□ -1.67
SSR1P43307 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.63□□□□□ -1.67
SSR1P43307 CFTRP1-201ENST00000456646 183 ntBASIC4.63□□□□□ -1.67
SSR1P43307 RPL21P126-201ENST00000470049 478 ntBASIC4.63□□□□□ -1.67
SSR1P43307 OR52A4P-201ENST00000472867 958 ntBASIC4.63□□□□□ -1.67
SSR1P43307 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSR1P43307 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.63□□□□□ -1.67
SSR1P43307 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.63□□□□□ -1.67
SSR1P43307 AC008694.2-201ENST00000517591 306 ntBASIC4.63□□□□□ -1.67
SSR1P43307 AC022790.1-201ENST00000522872 204 ntBASIC4.63□□□□□ -1.67
SSR1P43307 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.63□□□□□ -1.67
SSR1P43307 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.63□□□□□ -1.67
SSR1P43307 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.63□□□□□ -1.67
SSR1P43307 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.63□□□□□ -1.67
SSR1P43307 AP001180.3-201ENST00000582221 145 ntBASIC4.63□□□□□ -1.67
SSR1P43307 AC020910.2-201ENST00000603635 610 ntBASIC4.63□□□□□ -1.67
SSR1P43307 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.63□□□□□ -1.67
SSR1P43307 AC034236.3-201ENST00000605999 461 ntBASIC4.63□□□□□ -1.67
SSR1P43307 AC100847.1-201ENST00000611316 481 ntBASIC4.63□□□□□ -1.67
SSR1P43307 Mico1.1-201ENST00000611698 204 ntBASIC4.63□□□□□ -1.67
SSR1P43307 AL049539.1-201ENST00000611964 459 ntBASIC4.63□□□□□ -1.67
SSR1P43307 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.63□□□□□ -1.67
SSR1P43307 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSR1P43307 Z82217.1-201ENST00000625157 8149 ntBASIC4.63□□□□□ -1.67
SSR1P43307 SEPT7P7-201ENST00000420492 1301 ntBASIC4.63□□□□□ -1.67
SSR1P43307 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSR1P43307 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.63□□□□□ -1.67
SSR1P43307 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SSR1P43307 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SSR1P43307 AC025125.1-201ENST00000624743 1922 ntBASIC4.62□□□□□ -1.67
SSR1P43307 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SSR1P43307 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 RNU1-15P-201ENST00000353977 144 ntBASIC4.62□□□□□ -1.67
SSR1P43307 SNORD113.2-201ENST00000364166 89 ntBASIC4.62□□□□□ -1.67
SSR1P43307 RNA5SP167-201ENST00000365461 116 ntBASIC4.62□□□□□ -1.67
SSR1P43307 MT-TP-201ENST00000387461 68 ntBASIC4.62□□□□□ -1.67
SSR1P43307 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.62□□□□□ -1.67
SSR1P43307 MIR1911-201ENST00000410783 80 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.62□□□□□ -1.67
SSR1P43307 AL139128.1-201ENST00000413921 941 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AC119751.6-201ENST00000416712 186 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.62□□□□□ -1.67
SSR1P43307 RPEP2-201ENST00000432149 701 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.62□□□□□ -1.67
SSR1P43307 RAB28P3-201ENST00000448325 597 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.62□□□□□ -1.67
SSR1P43307 RPS26P15-201ENST00000488067 348 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AC005912.1-201ENST00000495392 255 ntBASIC4.62□□□□□ -1.67
SSR1P43307 ATP1B1P1-201ENST00000509767 915 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.62□□□□□ -1.67
SSR1P43307 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.62□□□□□ -1.67
SSR1P43307 AC008676.3-201ENST00000521237 435 ntBASIC4.62□□□□□ -1.67
SSR1P43307 TRAV11-201ENST00000539512 339 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.62□□□□□ -1.67
SSR1P43307 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.62□□□□□ -1.67
SSR1P43307 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.62□□□□□ -1.67
SSR1P43307 AC007687.1-201ENST00000602704 304 ntBASIC4.62□□□□□ -1.67
SSR1P43307 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.62□□□□□ -1.67
SSR1P43307 AL391261.4-201ENST00000616012 481 ntBASIC4.62□□□□□ -1.67
SSR1P43307 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.62□□□□□ -1.67
SSR1P43307 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSR1P43307 RAD17P1-201ENST00000418130 2042 ntBASIC4.62□□□□□ -1.67
SSR1P43307 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSR1P43307 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
SSR1P43307 U1.1-201ENST00000384101 164 ntBASIC4.61□□□□□ -1.67
SSR1P43307 MIR513A2-201ENST00000385249 127 ntBASIC4.61□□□□□ -1.67
SSR1P43307 VN1R8P-201ENST00000407739 893 ntBASIC4.61□□□□□ -1.67
SSR1P43307 TRIM60P17-201ENST00000415181 719 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC069213.2-201ENST00000420238 366 ntBASIC4.61□□□□□ -1.67
SSR1P43307 USP9YP9-201ENST00000429406 715 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC093716.1-201ENST00000435923 377 ntBASIC4.61□□□□□ -1.67
SSR1P43307 CACYBPP1-201ENST00000438592 684 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.61□□□□□ -1.67
SSR1P43307 AC078785.3-201ENST00000476607 425 ntBASIC4.61□□□□□ -1.67
SSR1P43307 TMED11P-201ENST00000479478 690 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC092451.1-201ENST00000480211 153 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC008897.1-201ENST00000494006 347 ntBASIC4.61□□□□□ -1.67
SSR1P43307 AC104164.2-201ENST00000496953 495 ntBASIC4.61□□□□□ -1.67
SSR1P43307 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms