Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 FO393419.3-201ENST00000428741 282 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN6P29350 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN6P29350 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN6P29350 UBTFL6-201ENST00000477929 1024 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 RPL23AP72-201ENST00000492447 435 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN6P29350 MTND4LP2-201ENST00000502312 285 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 SETP12-201ENST00000514068 805 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN6P29350 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN6P29350 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN6P29350 AC233266.2-201ENST00000567067 528 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 MTND6P33-201ENST00000571794 183 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN6P29350 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN6P29350 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN6P29350 AC135178.6-201ENST00000605314 398 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 AL450270.1-201ENST00000606160 391 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 AC004775.1-201ENST00000607389 753 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTPN6P29350 AC067852.7-201ENST00000623270 535 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 AC090617.9-201ENST00000623751 147 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 U3.53-201ENST00000628922 216 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 ZNF90P1-201ENST00000480493 1951 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 NXPH1-205ENST00000602349 1953 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN6P29350 AC139769.1-204ENST00000472297 1931 ntBASIC4.27□□□□□ -1.73
PTPN6P29350 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
PTPN6P29350 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN6P29350 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN6P29350 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN6P29350 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 AC006042.3-201ENST00000454684 1469 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AC100871.1-201ENST00000507871 1456 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 RNU1-94P-201ENST00000362627 173 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 RNU1-87P-201ENST00000363727 170 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN6P29350 SNORA70F-201ENST00000384142 135 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 MIR708-201ENST00000390708 88 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 SDHCP2-201ENST00000398565 501 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 VN1R8P-201ENST00000407739 893 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 SNORA74C-2-201ENST00000411179 201 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN6P29350 LINC01881-201ENST00000416103 412 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 YWHAZP2-201ENST00000440317 728 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 MTND2P8-201ENST00000450555 1025 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AC009220.1-201ENST00000451614 275 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 CEACAMP6-201ENST00000452007 574 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 MTND2P6-201ENST00000455337 1030 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 EIF2S2P5-201ENST00000457635 968 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 RN7SL354P-201ENST00000469282 294 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AC104763.1-201ENST00000475274 360 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 S100A11P1-201ENST00000477525 312 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN6P29350 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 AC015795.1-201ENST00000513669 327 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AC103833.1-201ENST00000517442 172 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN6P29350 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN6P29350 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN6P29350 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 AC093014.1-201ENST00000548926 724 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 GLRXP2-201ENST00000555594 321 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN6P29350 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN6P29350 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN6P29350 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 RPL23AP97-201ENST00000568955 471 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN6P29350 AF230666.2-201ENST00000602328 725 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AC010680.3-201ENST00000604215 520 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AL645927.2-201ENST00000618350 349 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 AP000346.3-201ENST00000622821 210 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 AC055839.1-201ENST00000634467 498 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.26□□□□□ -1.73
PTPN6P29350 AC009452.1-201ENST00000640823 606 ntBASIC4.26□□□□□ -1.73
PTPN6P29350 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN6P29350 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN6P29350 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PTPN6P29350 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PTPN6P29350 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PTPN6P29350 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN6P29350 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN6P29350 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN6P29350 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
PTPN6P29350 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN6P29350 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN6P29350 MTND4P31-201ENST00000425607 1343 ntBASIC4.25□□□□□ -1.73
PTPN6P29350 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PTPN6P29350 AC025125.1-201ENST00000624743 1922 ntBASIC4.25□□□□□ -1.73
PTPN6P29350 AL133412.1-201ENST00000380194 2992 ntBASIC4.25□□□□□ -1.73
PTPN6P29350 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN6P29350 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PTPN6P29350 RNA5SP307-201ENST00000362863 116 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms