Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.75□□□□□ -1.81
USF1P22415 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.75□□□□□ -1.81
USF1P22415 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.75□□□□□ -1.81
USF1P22415 AC091167.1-201ENST00000492017 396 ntBASIC3.75□□□□□ -1.81
USF1P22415 PCNAP1-201ENST00000505363 709 ntBASIC3.75□□□□□ -1.81
USF1P22415 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.75□□□□□ -1.81
USF1P22415 AC090281.1-201ENST00000523019 276 ntBASIC3.75□□□□□ -1.81
USF1P22415 TRAV11-201ENST00000539512 339 ntBASIC3.75□□□□□ -1.81
USF1P22415 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.75□□□□□ -1.81
USF1P22415 AC091178.1-203ENST00000584586 279 ntBASIC3.75□□□□□ -1.81
USF1P22415 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.75□□□□□ -1.81
USF1P22415 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
USF1P22415 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.75□□□□□ -1.81
USF1P22415 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.75□□□□□ -1.81
USF1P22415 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USF1P22415 MTND4P26-201ENST00000415971 1359 ntBASIC3.75□□□□□ -1.81
USF1P22415 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.75□□□□□ -1.81
USF1P22415 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
USF1P22415 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 HSPD1P14-201ENST00000432666 1618 ntBASIC3.74□□□□□ -1.81
USF1P22415 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF1P22415 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USF1P22415 RNU1-20P-201ENST00000363314 162 ntBASIC3.74□□□□□ -1.81
USF1P22415 RNU6-666P-201ENST00000363499 107 ntBASIC3.74□□□□□ -1.81
USF1P22415 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF1P22415 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USF1P22415 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF1P22415 MIR92A2-201ENST00000385299 75 ntBASIC3.74□□□□□ -1.81
USF1P22415 AL035696.2-201ENST00000407941 709 ntBASIC3.74□□□□□ -1.81
USF1P22415 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USF1P22415 AC004448.2-201ENST00000422360 586 ntBASIC3.74□□□□□ -1.81
USF1P22415 AL356806.1-201ENST00000422524 916 ntBASIC3.74□□□□□ -1.81
USF1P22415 PDSS1P1-201ENST00000422953 1114 ntBASIC3.74□□□□□ -1.81
USF1P22415 RPL21P43-201ENST00000425440 472 ntBASIC3.74□□□□□ -1.81
USF1P22415 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USF1P22415 UBE2V2P3-201ENST00000433562 437 ntBASIC3.74□□□□□ -1.81
USF1P22415 XKRYP6-201ENST00000440468 1116 ntBASIC3.74□□□□□ -1.81
USF1P22415 XKRYP3-201ENST00000442113 1116 ntBASIC3.74□□□□□ -1.81
USF1P22415 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.74□□□□□ -1.81
USF1P22415 AL627224.1-201ENST00000448334 444 ntBASIC3.74□□□□□ -1.81
USF1P22415 AC053481.1-201ENST00000467217 306 ntBASIC3.74□□□□□ -1.81
USF1P22415 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.74□□□□□ -1.81
USF1P22415 RN7SL817P-201ENST00000480777 288 ntBASIC3.74□□□□□ -1.81
USF1P22415 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 RPS27AP16-201ENST00000492222 470 ntBASIC3.74□□□□□ -1.81
USF1P22415 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.74□□□□□ -1.81
USF1P22415 RNU6-491P-201ENST00000516099 110 ntBASIC3.74□□□□□ -1.81
USF1P22415 HMGB1P23-201ENST00000518743 568 ntBASIC3.74□□□□□ -1.81
USF1P22415 AP003730.1-201ENST00000524605 285 ntBASIC3.74□□□□□ -1.81
USF1P22415 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.74□□□□□ -1.81
USF1P22415 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.74□□□□□ -1.81
USF1P22415 AC090515.3-201ENST00000560431 315 ntBASIC3.74□□□□□ -1.81
USF1P22415 AC027455.1-201ENST00000574104 594 ntBASIC3.74□□□□□ -1.81
USF1P22415 AC093227.2-201ENST00000589357 285 ntBASIC3.74□□□□□ -1.81
USF1P22415 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 AP001542.1-201ENST00000591314 200 ntBASIC3.74□□□□□ -1.81
USF1P22415 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.74□□□□□ -1.81
USF1P22415 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 AL391834.1-201ENST00000609609 560 ntBASIC3.74□□□□□ -1.81
USF1P22415 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.74□□□□□ -1.81
USF1P22415 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 uc_338.9-201ENST00000617424 182 ntBASIC3.74□□□□□ -1.81
USF1P22415 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
USF1P22415 AC005086.4-201ENST00000623065 213 ntBASIC3.74□□□□□ -1.81
USF1P22415 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.74□□□□□ -1.81
USF1P22415 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USF1P22415 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
USF1P22415 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.74□□□□□ -1.81
USF1P22415 AC007390.2-201ENST00000606229 3803 ntBASIC3.74□□□□□ -1.81
USF1P22415 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
USF1P22415 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 RNA5SP498-201ENST00000411342 120 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.73□□□□□ -1.81
USF1P22415 RNF19BPX-201ENST00000426224 625 ntBASIC3.73□□□□□ -1.81
USF1P22415 RPL23AP25-201ENST00000430973 463 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 AL606490.7-201ENST00000433136 191 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms