Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KCNA3P22001 SPATA2P1-201ENST00000431223 2055 ntBASIC5.7□□□□□ -1.5
KCNA3P22001 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KCNA3P22001 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
KCNA3P22001 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.69□□□□□ -1.5
KCNA3P22001 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.69□□□□□ -1.5
KCNA3P22001 AC108467.2-201ENST00000617640 1597 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 RNU5B-1-201ENST00000363286 116 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 AL603865.2-201ENST00000401679 213 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 RPS27AP11-201ENST00000402798 447 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.69□□□□□ -1.5
KCNA3P22001 AC005189.1-201ENST00000431286 310 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 OR10R1P-201ENST00000441524 1141 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.69□□□□□ -1.5
KCNA3P22001 VN1R25P-201ENST00000443385 738 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.69□□□□□ -1.5
KCNA3P22001 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.69□□□□□ -1.5
KCNA3P22001 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.69□□□□□ -1.5
KCNA3P22001 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.69□□□□□ -1.5
KCNA3P22001 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.69□□□□□ -1.5
KCNA3P22001 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.69□□□□□ -1.5
KCNA3P22001 AC005351.1-201ENST00000511152 786 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 AC108064.1-201ENST00000513791 460 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.69□□□□□ -1.5
KCNA3P22001 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 RNU1-45P-201ENST00000517191 141 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.69□□□□□ -1.5
KCNA3P22001 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.69□□□□□ -1.5
KCNA3P22001 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 VN1R87P-201ENST00000596706 487 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 AC002487.1-201ENST00000604565 994 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.69□□□□□ -1.5
KCNA3P22001 AL355493.4-201ENST00000618530 292 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 CU459211.1-201ENST00000635667 749 ntBASIC5.69□□□□□ -1.5
KCNA3P22001 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.69□□□□□ -1.5
KCNA3P22001 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
KCNA3P22001 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KCNA3P22001 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.69□□□□□ -1.5
KCNA3P22001 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KCNA3P22001 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KCNA3P22001 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KCNA3P22001 EIF2AP4-201ENST00000424793 1781 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AC009643.2-201ENST00000603543 1448 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 DDX18P6-201ENST00000450119 1997 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.68□□□□□ -1.5
KCNA3P22001 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.68□□□□□ -1.5
KCNA3P22001 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KCNA3P22001 RNU6-906P-201ENST00000384700 70 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 RPL12P9-201ENST00000412942 488 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AC005005.2-201ENST00000420779 380 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.68□□□□□ -1.5
KCNA3P22001 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.68□□□□□ -1.5
KCNA3P22001 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.68□□□□□ -1.5
KCNA3P22001 AC000041.1-201ENST00000439655 175 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AC107398.1-201ENST00000486904 505 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 GOLGA5P1-201ENST00000507317 980 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AC108475.1-201ENST00000507880 950 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.68□□□□□ -1.5
KCNA3P22001 PARP4P3-201ENST00000510265 317 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AC108120.2-201ENST00000512973 294 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AC119751.5-201ENST00000514077 770 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 MTND4LP31-201ENST00000514859 294 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.68□□□□□ -1.5
KCNA3P22001 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.68□□□□□ -1.5
KCNA3P22001 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.68□□□□□ -1.5
KCNA3P22001 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
KCNA3P22001 RN7SL600P-201ENST00000581811 299 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.68□□□□□ -1.5
KCNA3P22001 AC113368.1-201ENST00000603736 382 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AL162574.1-201ENST00000615702 950 ntBASIC5.68□□□□□ -1.5
KCNA3P22001 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.68□□□□□ -1.5
KCNA3P22001 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.68□□□□□ -1.5
KCNA3P22001 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KCNA3P22001 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KCNA3P22001 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KCNA3P22001 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.67□□□□□ -1.5
KCNA3P22001 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
KCNA3P22001 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KCNA3P22001 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.67□□□□□ -1.5
KCNA3P22001 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KCNA3P22001 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.67□□□□□ -1.5
KCNA3P22001 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.67□□□□□ -1.5
KCNA3P22001 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KCNA3P22001 SNORA62.3-201ENST00000365110 153 ntBASIC5.67□□□□□ -1.5
KCNA3P22001 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KCNA3P22001 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KCNA3P22001 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
KCNA3P22001 AL139095.3-201ENST00000419672 1203 ntBASIC5.67□□□□□ -1.5
KCNA3P22001 USP9YP21-201ENST00000420603 432 ntBASIC5.67□□□□□ -1.5
KCNA3P22001 E2F6P2-201ENST00000420708 748 ntBASIC5.67□□□□□ -1.5
KCNA3P22001 AL117339.2-201ENST00000430475 180 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms