Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC139769.1-204ENST00000472297 1931 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AP001273.1-201ENST00000624493 3152 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 OR4K15-201ENST00000305051 1216 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC079741.1-201ENST00000321498 212 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 RNA5SP505-201ENST00000364748 108 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 RPS4XP9-201ENST00000405151 780 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC004987.3-201ENST00000413879 771 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC245028.1-201ENST00000423259 256 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 RPL23AP93-201ENST00000440847 484 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 ARL4AP3-201ENST00000441452 574 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 BTBD7P2-201ENST00000441962 620 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AL500527.1-201ENST00000448532 255 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 RPS29P33-201ENST00000456717 146 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 RN7SL346P-201ENST00000491561 294 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC010374.1-201ENST00000503762 1237 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 RN7SKP283-201ENST00000517197 270 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 HMGB1P23-201ENST00000518743 568 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 LINC00557-201ENST00000563184 1279 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC234771.5-201ENST00000600161 514 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 NTAN1P1-201ENST00000603150 646 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC115621.1-201ENST00000604653 858 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 MIR6748-201ENST00000610433 71 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AL133243.1-201ENST00000614487 366 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC099669.2-201ENST00000616549 437 ntBASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DPA1P20036 DHX40P1-201ENST00000588725 1412 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 MAPK10-349ENST00000641767 3661 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 OR52E6-202ENST00000379946 954 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 MIR195-201ENST00000385194 87 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 GLULP6-201ENST00000399502 913 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 HMGB3P18-201ENST00000406327 590 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AC069213.2-201ENST00000420238 366 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 RPS12P10-201ENST00000427031 377 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 VN1R32P-201ENST00000452234 905 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 NDUFA12P1-201ENST00000455914 406 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 S100A11P1-201ENST00000477525 312 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 SETP12-201ENST00000514068 805 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AP001781.1-201ENST00000530977 207 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 PTP4A1P6-201ENST00000531034 478 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AP001180.3-201ENST00000582221 145 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AP002360.3-201ENST00000607673 710 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DPA1P20036 uc_338.18-201ENST00000615451 175 ntBASIC4.55□□□□□ -1.68
HLA-DPA1P20036 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms