Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
ERCC3P19447 SULT1C2P1-202ENST00000562418 459 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC141257.3-201ENST00000572906 215 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 AC012065.4-201ENST00000602445 679 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC093388.1-201ENST00000609166 430 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC009509.4-201ENST00000619202 509 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC3P19447 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
ERCC3P19447 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.74□□□□□ -1.33
ERCC3P19447 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC3P19447 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC3P19447 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC3P19447 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
ERCC3P19447 AC010266.2-201ENST00000564741 3255 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC3P19447 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 AL603750.1-201ENST00000624216 1717 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC3P19447 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC3P19447 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC3P19447 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC3P19447 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
ERCC3P19447 RN7SKP124-201ENST00000364730 341 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 RNU6-921P-201ENST00000384361 107 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC3P19447 OR6E1P-201ENST00000414424 923 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC3P19447 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 RPS24P1-201ENST00000438550 371 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 RPS12P17-201ENST00000438591 377 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC3P19447 TRGVB-201ENST00000453257 471 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC3P19447 RN7SL515P-201ENST00000463999 297 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 RN7SL184P-201ENST00000488308 297 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AC107401.1-201ENST00000503426 685 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 RNU6-720P-201ENST00000516363 108 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 AC025881.1-201ENST00000518851 512 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 IGLV2-28-201ENST00000520681 304 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC3P19447 AP000790.1-201ENST00000528891 737 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 OR4A12P-201ENST00000530847 918 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 LSM6P2-201ENST00000552208 177 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AC063949.1-201ENST00000552900 865 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.73□□□□□ -1.33
ERCC3P19447 IGBP1P1-201ENST00000554337 1009 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AL049872.1-201ENST00000556323 322 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC3P19447 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
ERCC3P19447 AC110743.1-201ENST00000584870 478 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.73□□□□□ -1.33
ERCC3P19447 AC104785.1-201ENST00000603220 588 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 TAS2R6P-201ENST00000605022 826 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AL021997.1-201ENST00000605757 193 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC3P19447 AC008498.1-201ENST00000613012 531 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 AC027807.2-201ENST00000616099 408 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 AP001005.3-201ENST00000622049 129 ntBASIC6.73□□□□□ -1.33
ERCC3P19447 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC3P19447 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.73□□□□□ -1.33
ERCC3P19447 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.73□□□□□ -1.33
ERCC3P19447 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.73□□□□□ -1.33
ERCC3P19447 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ERCC3P19447 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
ERCC3P19447 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ERCC3P19447 AC004656.1-201ENST00000568479 4951 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 AL590763.1-201ENST00000398297 1545 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.72□□□□□ -1.33
ERCC3P19447 RNA5SP211-201ENST00000365516 117 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 RPL17P12-201ENST00000413391 526 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 AC009302.1-201ENST00000417147 390 ntBASIC6.72□□□□□ -1.33
ERCC3P19447 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.72□□□□□ -1.33
ERCC3P19447 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms