Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.56□□□□□ -1.36
CFTRP13569 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.56□□□□□ -1.36
CFTRP13569 AC100770.1-201ENST00000532310 322 ntBASIC6.56□□□□□ -1.36
CFTRP13569 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.56□□□□□ -1.36
CFTRP13569 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.56□□□□□ -1.36
CFTRP13569 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.56□□□□□ -1.36
CFTRP13569 AC115621.1-201ENST00000604653 858 ntBASIC6.56□□□□□ -1.36
CFTRP13569 MIR8058-201ENST00000615737 89 ntBASIC6.56□□□□□ -1.36
CFTRP13569 AC010480.1-201ENST00000624823 684 ntBASIC6.56□□□□□ -1.36
CFTRP13569 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CFTRP13569 Z95327.2-201ENST00000414579 1873 ntBASIC6.56□□□□□ -1.36
CFTRP13569 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CFTRP13569 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CFTRP13569 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CFTRP13569 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC6.56□□□□□ -1.36
CFTRP13569 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.56□□□□□ -1.36
CFTRP13569 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CFTRP13569 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.55□□□□□ -1.36
CFTRP13569 AC067945.1-201ENST00000342609 618 ntBASIC6.55□□□□□ -1.36
CFTRP13569 AC073335.1-201ENST00000427776 363 ntBASIC6.55□□□□□ -1.36
CFTRP13569 RPL21P110-201ENST00000433345 446 ntBASIC6.55□□□□□ -1.36
CFTRP13569 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.55□□□□□ -1.36
CFTRP13569 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.55□□□□□ -1.36
CFTRP13569 AC017015.1-201ENST00000477387 286 ntBASIC6.55□□□□□ -1.36
CFTRP13569 AC006517.1-201ENST00000480485 328 ntBASIC6.55□□□□□ -1.36
CFTRP13569 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CFTRP13569 AC008694.2-201ENST00000517591 306 ntBASIC6.55□□□□□ -1.36
CFTRP13569 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.55□□□□□ -1.36
CFTRP13569 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.55□□□□□ -1.36
CFTRP13569 SLC25A36P1-201ENST00000590111 465 ntBASIC6.55□□□□□ -1.36
CFTRP13569 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.55□□□□□ -1.36
CFTRP13569 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
CFTRP13569 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CFTRP13569 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CFTRP13569 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CFTRP13569 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CFTRP13569 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CFTRP13569 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.54□□□□□ -1.36
CFTRP13569 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.54□□□□□ -1.36
CFTRP13569 RNA5SP120-201ENST00000410900 112 ntBASIC6.54□□□□□ -1.36
CFTRP13569 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.54□□□□□ -1.36
CFTRP13569 HMGB1P37-201ENST00000439613 609 ntBASIC6.54□□□□□ -1.36
CFTRP13569 SETD6P1-201ENST00000444575 317 ntBASIC6.54□□□□□ -1.36
CFTRP13569 FTH1P25-201ENST00000447665 469 ntBASIC6.54□□□□□ -1.36
CFTRP13569 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.54□□□□□ -1.36
CFTRP13569 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.54□□□□□ -1.36
CFTRP13569 AC012158.1-204ENST00000483430 465 ntBASIC6.54□□□□□ -1.36
CFTRP13569 RAC1P2-201ENST00000511164 579 ntBASIC6.54□□□□□ -1.36
CFTRP13569 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.54□□□□□ -1.36
CFTRP13569 SNORA62.6-201ENST00000606322 83 ntBASIC6.54□□□□□ -1.36
CFTRP13569 AL513477.2-201ENST00000607858 568 ntBASIC6.54□□□□□ -1.36
CFTRP13569 AC007823.1-201ENST00000569932 1566 ntBASIC6.54□□□□□ -1.36
CFTRP13569 AL672167.1-205ENST00000641112 3080 ntBASIC6.54□□□□□ -1.36
CFTRP13569 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.54□□□□□ -1.36
CFTRP13569 AL365440.1-201ENST00000436135 2167 ntBASIC6.54□□□□□ -1.36
CFTRP13569 MIR1251-201ENST00000408552 70 ntBASIC6.53□□□□□ -1.36
CFTRP13569 AL591363.1-201ENST00000450091 483 ntBASIC6.53□□□□□ -1.36
CFTRP13569 AL136126.1-201ENST00000473603 402 ntBASIC6.53□□□□□ -1.36
CFTRP13569 DEFB109F-201ENST00000491870 277 ntBASIC6.53□□□□□ -1.36
CFTRP13569 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.53□□□□□ -1.36
CFTRP13569 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.53□□□□□ -1.36
CFTRP13569 AC069240.1-201ENST00000548774 375 ntBASIC6.53□□□□□ -1.36
CFTRP13569 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CFTRP13569 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CFTRP13569 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.53□□□□□ -1.36
CFTRP13569 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.53□□□□□ -1.36
CFTRP13569 AP001642.1-201ENST00000624727 2117 ntBASIC6.53□□□□□ -1.36
CFTRP13569 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CFTRP13569 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CFTRP13569 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
CFTRP13569 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CFTRP13569 VN1R8P-201ENST00000407739 893 ntBASIC6.53□□□□□ -1.36
CFTRP13569 AC022695.1-201ENST00000522089 237 ntBASIC6.53□□□□□ -1.36
CFTRP13569 AC024224.1-201ENST00000538284 609 ntBASIC6.53□□□□□ -1.36
CFTRP13569 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.53□□□□□ -1.36
CFTRP13569 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.53□□□□□ -1.36
CFTRP13569 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CFTRP13569 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CFTRP13569 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.52□□□□□ -1.37
CFTRP13569 MIR1289-1-201ENST00000408836 144 ntBASIC6.52□□□□□ -1.37
CFTRP13569 HMGN2P27-201ENST00000427352 270 ntBASIC6.52□□□□□ -1.37
CFTRP13569 OR6C71P-201ENST00000432580 913 ntBASIC6.52□□□□□ -1.37
CFTRP13569 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.52□□□□□ -1.37
CFTRP13569 DCLRE1CP1-201ENST00000454630 470 ntBASIC6.52□□□□□ -1.37
CFTRP13569 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.52□□□□□ -1.37
CFTRP13569 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.52□□□□□ -1.37
CFTRP13569 SMCR2_2.1-201ENST00000619783 161 ntBASIC6.52□□□□□ -1.37
CFTRP13569 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CFTRP13569 AC005005.4-201ENST00000623789 16698 ntBASIC6.52□□□□□ -1.37
CFTRP13569 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CFTRP13569 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CFTRP13569 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CFTRP13569 CDY11P-201ENST00000447168 1651 ntBASIC6.51□□□□□ -1.37
CFTRP13569 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CFTRP13569 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.51□□□□□ -1.37
CFTRP13569 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC6.51□□□□□ -1.37
CFTRP13569 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CFTRP13569 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CFTRP13569 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CFTRP13569 RNU1-15P-201ENST00000353977 144 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms