Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
FREM3P0C091 RPS29P7-201ENST00000439662 171 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.59□□□□□ -1.84
FREM3P0C091 AC022034.3-201ENST00000471393 478 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 RPS26P15-201ENST00000488067 348 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 AC138409.2-202ENST00000507274 458 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 AC017037.1-201ENST00000508460 471 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.59□□□□□ -1.84
FREM3P0C091 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.59□□□□□ -1.84
FREM3P0C091 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC3.59□□□□□ -1.84
FREM3P0C091 AC015726.1-201ENST00000602353 681 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.59□□□□□ -1.84
FREM3P0C091 AL354798.1-201ENST00000622505 329 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.59□□□□□ -1.84
FREM3P0C091 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
FREM3P0C091 PROS2P-201ENST00000474651 1951 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
FREM3P0C091 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.58□□□□□ -1.84
FREM3P0C091 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.58□□□□□ -1.84
FREM3P0C091 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
FREM3P0C091 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 SNORD35B-201ENST00000363660 87 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 RNU11-4P-201ENST00000391149 133 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 MTCO1P54-201ENST00000430139 712 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 HMGB1P37-201ENST00000439613 609 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.58□□□□□ -1.84
FREM3P0C091 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.58□□□□□ -1.84
FREM3P0C091 AC023632.4-201ENST00000517783 191 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 AC022695.1-201ENST00000522089 237 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 OR8R1P-201ENST00000543943 764 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 CCNG2P1-201ENST00000549521 1000 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 NPM1P47-201ENST00000560843 856 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 AC022655.2-201ENST00000577280 318 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 RNU1-30P-201ENST00000606575 163 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 AP000255.1-201ENST00000610276 676 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.58□□□□□ -1.84
FREM3P0C091 AC073869.7-201ENST00000640874 297 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 ZNF285B-201ENST00000561698 1767 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
FREM3P0C091 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.58□□□□□ -1.84
FREM3P0C091 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 CDY11P-201ENST00000447168 1651 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.58□□□□□ -1.84
FREM3P0C091 AL590806.1-201ENST00000415818 853 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 OR8F1P-201ENST00000425243 930 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 NANOGP6-201ENST00000429190 847 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.58□□□□□ -1.84
FREM3P0C091 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FREM3P0C091 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.58□□□□□ -1.84
FREM3P0C091 AC063950.1-201ENST00000552036 308 ntBASIC3.58□□□□□ -1.84
FREM3P0C091 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.58□□□□□ -1.84
FREM3P0C091 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.58□□□□□ -1.84
FREM3P0C091 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
FREM3P0C091 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 BTBD10P1-201ENST00000549824 1352 ntBASIC3.57□□□□□ -1.84
FREM3P0C091 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.57□□□□□ -1.84
FREM3P0C091 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
FREM3P0C091 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 MIR448-201ENST00000362131 111 ntBASIC3.57□□□□□ -1.84
FREM3P0C091 RPL21P17-201ENST00000397467 475 ntBASIC3.57□□□□□ -1.84
FREM3P0C091 HMGN2P31-201ENST00000432430 273 ntBASIC3.57□□□□□ -1.84
FREM3P0C091 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.57□□□□□ -1.84
FREM3P0C091 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.57□□□□□ -1.84
FREM3P0C091 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.57□□□□□ -1.84
FREM3P0C091 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.57□□□□□ -1.84
FREM3P0C091 RPL23AP87-202ENST00000573039 466 ntBASIC3.57□□□□□ -1.84
FREM3P0C091 SNX6P1-201ENST00000601728 1224 ntBASIC3.57□□□□□ -1.84
FREM3P0C091 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.57□□□□□ -1.84
FREM3P0C091 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
FREM3P0C091 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.57□□□□□ -1.84
FREM3P0C091 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
FREM3P0C091 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.57□□□□□ -1.84
FREM3P0C091 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
FREM3P0C091 RNA5SP119-201ENST00000362715 117 ntBASIC3.56□□□□□ -1.84
FREM3P0C091 RNA5SP44-201ENST00000410446 133 ntBASIC3.56□□□□□ -1.84
FREM3P0C091 YWHAQP9-201ENST00000445891 512 ntBASIC3.56□□□□□ -1.84
FREM3P0C091 NANOGP10-201ENST00000453325 895 ntBASIC3.56□□□□□ -1.84
FREM3P0C091 AL139099.1-201ENST00000497398 403 ntBASIC3.56□□□□□ -1.84
FREM3P0C091 NDUFA5P2-201ENST00000519723 344 ntBASIC3.56□□□□□ -1.84
FREM3P0C091 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.56□□□□□ -1.84
FREM3P0C091 DPRXP4-201ENST00000578053 568 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms