Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 LINC02471-203ENST00000641941 4752 ntBASIC3.99□□□□□ -1.77
HLA-DQB2P05538 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DQB2P05538 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AL672167.2-201ENST00000377164 879 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 OR51A6P-201ENST00000418680 1004 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 HMGB3P22-202ENST00000451823 572 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 RPS26P15-201ENST00000488067 348 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC120057.2-201ENST00000571520 271 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC020910.2-201ENST00000603635 610 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AL592436.1-201ENST00000605135 558 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AC105105.5-201ENST00000622635 1294 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AP003499.2-201ENST00000624100 483 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 UBE3AP2-201ENST00000429033 2259 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 IPO8P1-201ENST00000455509 3109 ntBASIC3.98□□□□□ -1.77
HLA-DQB2P05538 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DQB2P05538 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 OR52B1P-201ENST00000316506 909 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AL450992.3-201ENST00000413192 568 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 Z97055.1-201ENST00000419730 712 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 RPL21P89-201ENST00000444021 467 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 TPT1P3-201ENST00000492841 512 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AC092593.2-201ENST00000513866 913 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AC007224.1-201ENST00000564410 144 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 OR1AB1P-201ENST00000585564 761 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AC090948.2-201ENST00000607363 564 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 LINC00901.1-201ENST00000617252 152 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 AL139089.1-201ENST00000620372 975 ntBASIC3.97□□□□□ -1.77
HLA-DQB2P05538 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DQB2P05538 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
HLA-DQB2P05538 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HLA-DQB2P05538 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HLA-DQB2P05538 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
HLA-DQB2P05538 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
HLA-DQB2P05538 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 OR8F1P-201ENST00000425243 930 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 HMGB3P9-201ENST00000441799 583 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AC103987.1-201ENST00000473394 348 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 NPM1P47-201ENST00000560843 856 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms