Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SMC4P1-201ENST00000414479 527 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 Z97055.1-201ENST00000419730 712 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 USP12PY-201ENST00000427677 1064 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AL117339.2-201ENST00000430475 180 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 SNORA71B-202ENST00000439232 272 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 AL500522.2-201ENST00000448562 343 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC104306.1-201ENST00000449702 371 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 RPL23AP71-201ENST00000470966 469 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 RPS3AP6-201ENST00000484430 795 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC010342.1-201ENST00000514047 877 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 RNA5SP208-201ENST00000516156 78 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 SCARNA14-201ENST00000516903 136 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC096553.1-201ENST00000605169 829 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC006338.2-201ENST00000616864 791 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CTDNEP1O95476 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTDNEP1O95476 AC017007.4-201ENST00000503353 1352 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTDNEP1O95476 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CTDNEP1O95476 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTDNEP1O95476 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTDNEP1O95476 RNA5SP283-201ENST00000365604 119 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 RNU6-729P-201ENST00000384399 107 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 AC013470.3-201ENST00000420252 1194 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 NPM1P48-201ENST00000436002 853 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 AC006326.1-201ENST00000445465 787 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 RPL10P17-201ENST00000453852 316 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 PPIAP15-201ENST00000479662 484 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 SYT14P1-201ENST00000481459 721 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 HMGB1P50-201ENST00000605814 607 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 MIR6500-201ENST00000622700 86 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 MIR6810-201ENST00000622701 70 ntBASIC4.49□□□□□ -1.69
CTDNEP1O95476 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTDNEP1O95476 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CTDNEP1O95476 FAM91A3P-201ENST00000456826 2544 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTDNEP1O95476 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDNEP1O95476 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDNEP1O95476 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.48□□□□□ -1.69
CTDNEP1O95476 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.48□□□□□ -1.69
CTDNEP1O95476 SPRR2C-201ENST00000290702 219 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDNEP1O95476 HMGN2P8-201ENST00000391458 268 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTDNEP1O95476 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTDNEP1O95476 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.48□□□□□ -1.69
CTDNEP1O95476 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.48□□□□□ -1.69
CTDNEP1O95476 AC114755.5-201ENST00000447760 831 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 AL162151.2-201ENST00000448875 158 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 AC098583.1-201ENST00000480875 255 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 TRBV12-2-201ENST00000489763 344 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 CEACAMP10-202ENST00000495431 496 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.48□□□□□ -1.69
CTDNEP1O95476 NPM1P47-201ENST00000560843 856 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.48□□□□□ -1.69
CTDNEP1O95476 AL592436.1-201ENST00000605135 558 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 AL158196.1-201ENST00000616786 434 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 AP003499.2-201ENST00000624100 483 ntBASIC4.48□□□□□ -1.69
CTDNEP1O95476 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.48□□□□□ -1.69
CTDNEP1O95476 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CTDNEP1O95476 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTDNEP1O95476 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTDNEP1O95476 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTDNEP1O95476 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTDNEP1O95476 RNA5SP322-201ENST00000363617 119 ntBASIC4.47□□□□□ -1.69
CTDNEP1O95476 U1.1-201ENST00000384101 164 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms