Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 Y_RNA.646-201ENST00000410980 101 ntBASIC7.52□□□□□ -1.21
RNF40O75150 VDAC1P9-201ENST00000412766 841 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AC119618.1-201ENST00000434191 222 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF40O75150 SUMO2P4-201ENST00000504193 276 ntBASIC7.52□□□□□ -1.21
RNF40O75150 RN7SKP219-201ENST00000516825 296 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AC022360.1-201ENST00000521058 340 ntBASIC7.52□□□□□ -1.21
RNF40O75150 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
RNF40O75150 AC131935.1-201ENST00000524621 333 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AP005435.4-201ENST00000529514 284 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF40O75150 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 MIR4790-201ENST00000577799 79 ntBASIC7.52□□□□□ -1.21
RNF40O75150 MIR5095-201ENST00000578844 88 ntBASIC7.52□□□□□ -1.21
RNF40O75150 RN7SL32P-201ENST00000580514 281 ntBASIC7.52□□□□□ -1.21
RNF40O75150 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF40O75150 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF40O75150 AL513327.3-201ENST00000602618 469 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AL683813.2-201ENST00000605245 502 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AC004805.2-201ENST00000605382 482 ntBASIC7.52□□□□□ -1.21
RNF40O75150 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF40O75150 AL031777.2-201ENST00000611953 196 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AC135068.11-201ENST00000636378 921 ntBASIC7.52□□□□□ -1.21
RNF40O75150 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RNF40O75150 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF40O75150 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF40O75150 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF40O75150 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF40O75150 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF40O75150 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF40O75150 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.51□□□□□ -1.21
RNF40O75150 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF40O75150 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 AC112255.1-201ENST00000624070 2493 ntBASIC7.51□□□□□ -1.21
RNF40O75150 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 OR10D1P-201ENST00000355343 936 ntBASIC7.51□□□□□ -1.21
RNF40O75150 RNU6-874P-201ENST00000362390 105 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 Y_RNA.482-201ENST00000384377 111 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AL034417.1-201ENST00000399343 800 ntBASIC7.51□□□□□ -1.21
RNF40O75150 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC093155.2-201ENST00000420734 937 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AL022324.2-201ENST00000434827 780 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 AL450996.1-201ENST00000445574 1202 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF40O75150 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 RPL31P50-201ENST00000471002 296 ntBASIC7.51□□□□□ -1.21
RNF40O75150 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF40O75150 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 MRPL57P6-201ENST00000506570 309 ntBASIC7.51□□□□□ -1.21
RNF40O75150 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 AC008496.1-201ENST00000509131 295 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.51□□□□□ -1.21
RNF40O75150 RNU6-273P-201ENST00000516937 96 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC120036.3-201ENST00000517826 292 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 IGKV2-29-201ENST00000521304 372 ntBASIC7.51□□□□□ -1.21
RNF40O75150 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF40O75150 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF40O75150 OR8R1P-201ENST00000543943 764 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 AC090502.2-201ENST00000549267 280 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AL118558.2-201ENST00000556294 238 ntBASIC7.51□□□□□ -1.21
RNF40O75150 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.51□□□□□ -1.21
RNF40O75150 MIR5186-201ENST00000577504 120 ntBASIC7.51□□□□□ -1.21
RNF40O75150 SS18L2P2-201ENST00000583960 235 ntBASIC7.51□□□□□ -1.21
RNF40O75150 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF40O75150 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF40O75150 ATP1B3P1-201ENST00000605365 821 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC020634.1-201ENST00000608701 549 ntBASIC7.51□□□□□ -1.21
RNF40O75150 PLCE1P1-201ENST00000622094 305 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC005753.1-201ENST00000623837 618 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF40O75150 OR52H1-202ENST00000641796 1061 ntBASIC7.51□□□□□ -1.21
RNF40O75150 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF40O75150 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 CLCA3P-203ENST00000490028 2781 ntBASIC7.51□□□□□ -1.21
RNF40O75150 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF40O75150 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF40O75150 OR52B5P-204ENST00000641744 3467 ntBASIC7.51□□□□□ -1.21
RNF40O75150 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF40O75150 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms