Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC104417.1-201ENST00000523974 751 ntBASIC4.32□□□□□ -1.72
PRKNO60260 DUXAP5-201ENST00000529668 529 ntBASIC4.32□□□□□ -1.72
PRKNO60260 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.32□□□□□ -1.72
PRKNO60260 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.32□□□□□ -1.72
PRKNO60260 AC006518.2-201ENST00000542513 940 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.32□□□□□ -1.72
PRKNO60260 AC209154.1-201ENST00000582156 337 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AP005262.1-201ENST00000582646 997 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AC068790.4-201ENST00000602474 263 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AL137072.1-201ENST00000603444 466 ntBASIC4.32□□□□□ -1.72
PRKNO60260 MIR6798-201ENST00000612887 67 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AC011472.4-201ENST00000615848 491 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AL359757.1-201ENST00000623176 255 ntBASIC4.32□□□□□ -1.72
PRKNO60260 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.32□□□□□ -1.72
PRKNO60260 AC017104.5-201ENST00000637647 639 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AP000542.2-201ENST00000623199 6179 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.32□□□□□ -1.72
PRKNO60260 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRKNO60260 AC093591.2-201ENST00000565254 3843 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AC000374.1-201ENST00000434698 1745 ntBASIC4.32□□□□□ -1.72
PRKNO60260 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.32□□□□□ -1.72
PRKNO60260 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PRKNO60260 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PRKNO60260 MAPK10-263ENST00000641052 4307 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.31□□□□□ -1.72
PRKNO60260 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRKNO60260 ZFRP1-201ENST00000457579 2970 ntBASIC4.31□□□□□ -1.72
PRKNO60260 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRKNO60260 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.31□□□□□ -1.72
PRKNO60260 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRKNO60260 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PRKNO60260 SNORD113.2-201ENST00000364166 89 ntBASIC4.31□□□□□ -1.72
PRKNO60260 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.31□□□□□ -1.72
PRKNO60260 AL136131.1-201ENST00000406079 803 ntBASIC4.31□□□□□ -1.72
PRKNO60260 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 AL807761.1-201ENST00000417622 171 ntBASIC4.31□□□□□ -1.72
PRKNO60260 OR6C64P-201ENST00000419708 825 ntBASIC4.31□□□□□ -1.72
PRKNO60260 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.31□□□□□ -1.72
PRKNO60260 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.31□□□□□ -1.72
PRKNO60260 PTGES3P5-201ENST00000455109 434 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC079203.1-201ENST00000487972 404 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC093534.1-201ENST00000504977 132 ntBASIC4.31□□□□□ -1.72
PRKNO60260 BOLA3P3-201ENST00000505182 232 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.31□□□□□ -1.72
PRKNO60260 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.31□□□□□ -1.72
PRKNO60260 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 RFPL4AP5-201ENST00000514977 504 ntBASIC4.31□□□□□ -1.72
PRKNO60260 HMGB1P1-201ENST00000522557 636 ntBASIC4.31□□□□□ -1.72
PRKNO60260 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 AC023538.1-201ENST00000534576 736 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 AC025260.1-201ENST00000548858 430 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.31□□□□□ -1.72
PRKNO60260 SS18L2P2-201ENST00000583960 235 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC245036.5-201ENST00000596330 847 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.31□□□□□ -1.72
PRKNO60260 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.31□□□□□ -1.72
PRKNO60260 GAS5-AS1-201ENST00000602767 694 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.31□□□□□ -1.72
PRKNO60260 AC025811.1-201ENST00000604312 472 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC002487.1-201ENST00000604565 994 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC024060.1-201ENST00000607052 494 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.31□□□□□ -1.72
PRKNO60260 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PRKNO60260 U3.53-201ENST00000628922 216 ntBASIC4.31□□□□□ -1.72
PRKNO60260 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.31□□□□□ -1.72
PRKNO60260 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.31□□□□□ -1.72
PRKNO60260 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PRKNO60260 AL391684.1-202ENST00000641293 1636 ntBASIC4.31□□□□□ -1.72
PRKNO60260 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRKNO60260 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRKNO60260 AL031119.1-201ENST00000404707 1879 ntBASIC4.3□□□□□ -1.72
PRKNO60260 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 DHX40P1-201ENST00000588725 1412 ntBASIC4.3□□□□□ -1.72
PRKNO60260 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 AL022322.2-201ENST00000624072 20397 ntBASIC4.3□□□□□ -1.72
PRKNO60260 CCT8P1-201ENST00000413611 1657 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC021146.4-201ENST00000309229 279 ntBASIC4.3□□□□□ -1.72
PRKNO60260 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 RNU4-44P-201ENST00000363050 141 ntBASIC4.3□□□□□ -1.72
PRKNO60260 RNU6-185P-201ENST00000384421 107 ntBASIC4.3□□□□□ -1.72
PRKNO60260 SNORD116-12-201ENST00000384468 92 ntBASIC4.3□□□□□ -1.72
PRKNO60260 RNA5SP397-201ENST00000391323 118 ntBASIC4.3□□□□□ -1.72
PRKNO60260 RPL23AP59-201ENST00000399415 461 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AP000580.1-201ENST00000404439 358 ntBASIC4.3□□□□□ -1.72
PRKNO60260 RNU4-22P-201ENST00000411058 166 ntBASIC4.3□□□□□ -1.72
PRKNO60260 CTSL3P-202ENST00000412179 788 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.3□□□□□ -1.72
PRKNO60260 AC013404.1-201ENST00000413068 249 ntBASIC4.3□□□□□ -1.72
PRKNO60260 BTF3P8-201ENST00000414577 526 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.3□□□□□ -1.72
PRKNO60260 OR2X1P-201ENST00000421144 687 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms