Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 RPL23AP24-201ENST00000458203 385 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 RPS20P4-201ENST00000461659 355 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 RPL35AP15-201ENST00000468042 339 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 RNU6-362P-201ENST00000516736 90 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC068831.4-201ENST00000556118 109 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC104820.1-201ENST00000624183 307 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC140479.6-201ENST00000633535 357 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 FP325313.1-201ENST00000638228 703 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
TRAPPC4Q9Y296 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRAPPC4Q9Y296 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRAPPC4Q9Y296 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
TRAPPC4Q9Y296 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 RNU6-152P-201ENST00000384037 107 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 ST13P16-201ENST00000401760 781 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 MIR1911-201ENST00000410783 80 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC023141.6-201ENST00000429418 337 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AL606490.8-201ENST00000441624 319 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 FHP1-201ENST00000442741 703 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 CASP3P1-201ENST00000446037 609 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 CYCSP42-201ENST00000450823 238 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 EIF4A1P11-201ENST00000451239 222 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 RPL23AP81-201ENST00000455252 467 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC006517.1-201ENST00000480485 328 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC010374.1-201ENST00000503762 1237 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 IGLVIV-65-201ENST00000517313 360 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC010476.1-201ENST00000519111 851 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 OR8G5-201ENST00000524943 1041 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC005229.3-201ENST00000603438 323 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 BX322635.1-201ENST00000605804 496 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC090948.2-201ENST00000607363 564 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC009032.1-201ENST00000617574 431 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC138907.10-201ENST00000623708 983 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 AC139713.2-214ENST00000642059 1811 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAPPC4Q9Y296 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 OR4K17-201ENST00000315543 1032 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 RPL12P34-201ENST00000424532 479 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC022022.1-201ENST00000430304 178 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 RPEP2-201ENST00000432149 701 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 CEACAMP1-201ENST00000434624 1035 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 RPL23AP89-201ENST00000439324 255 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 YWHAQP9-201ENST00000445891 512 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AL157884.3-201ENST00000448273 1184 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC037198.2-201ENST00000478845 733 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 LARP7P4-201ENST00000481075 878 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC013356.1-201ENST00000489027 564 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 RNA5SP73-201ENST00000516744 108 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC026616.1-201ENST00000523157 525 ntBASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAPPC4Q9Y296 AC090515.3-201ENST00000560431 315 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms