Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IGLV3-24-201ENST00000517477 197 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 HMGB1P23-201ENST00000518743 568 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 NRBF2P4-201ENST00000520874 850 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 OR8A2P-201ENST00000528631 952 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL139174.1-201ENST00000531489 886 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 CCNG2P1-201ENST00000549521 1000 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AGGF1P8-201ENST00000562979 1000 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC022884.3-201ENST00000579571 248 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL109618.2-201ENST00000605527 211 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC024560.3-201ENST00000608482 349 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 RNA5SP440-201ENST00000612665 119 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC008498.1-201ENST00000613012 531 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC015712.7-201ENST00000615211 635 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 CU639417.4-201ENST00000623928 207 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 SRRM1P3-201ENST00000426911 2678 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 CDR1-202ENST00000625883 1485 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC107982.1-201ENST00000507171 1300 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 RN7SKP185-201ENST00000362813 326 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 RNA5SP122-201ENST00000384457 108 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 SNORA17A-201ENST00000391185 133 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 NCSTNP1-201ENST00000406229 144 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 MIR1284-201ENST00000408337 120 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 RNU2-66P-201ENST00000410650 161 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 MTND1P23-201ENST00000416931 372 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 LINC00993-201ENST00000420453 540 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 OR10T1P-201ENST00000424327 947 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 MRPS10P2-201ENST00000431226 381 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AL389925.1-201ENST00000432257 728 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 MTND2P20-201ENST00000440805 661 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AL596266.1-201ENST00000448132 400 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 OR6C5P-201ENST00000452388 923 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 DNAJB5P1-201ENST00000454004 806 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 SNORD125-201ENST00000459538 96 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC010307.1-201ENST00000467206 836 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC096741.1-201ENST00000472250 846 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 RPL37P25-201ENST00000507308 276 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 IGBP1P5-201ENST00000507524 1000 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AL133241.1-201ENST00000556832 487 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC020914.6-201ENST00000594327 272 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC026368.1-201ENST00000614934 690 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC126175.1-201ENST00000617041 758 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 SNORA17.5-201ENST00000630429 132 ntBASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PPARGC1AQ9UBK2 AC010266.2-201ENST00000564741 3255 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 PWAR1-201ENST00000624188 2414 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms