Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-883P-201ENST00000384597 107 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AL078604.1-201ENST00000404609 466 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 RN7SKP235-201ENST00000410662 305 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 EIF1P3-201ENST00000423841 334 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 RN7SL41P-201ENST00000476144 297 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 RPS27AP13-201ENST00000498403 237 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 HMGB1P3-201ENST00000502802 616 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 MTCO1P35-201ENST00000515270 228 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP519-201ENST00000516480 119 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP73-201ENST00000516744 108 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC090151.1-201ENST00000520784 730 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 TVP23BP1-201ENST00000557500 617 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC005034.4-201ENST00000603612 899 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC015802.5-201ENST00000607478 399 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC131238.1-201ENST00000617135 328 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AL162233.1-201ENST00000620014 944 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC140113.4-201ENST00000622087 222 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC005086.4-201ENST00000623065 213 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC079298.2-201ENST00000623885 459 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AL118508.4-201ENST00000624142 1176 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 DDX18P3-201ENST00000404856 2007 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC022893.2-201ENST00000564832 3296 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 EOGT-210ENST00000615922 1931 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 DDX6P1-205ENST00000441966 1436 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RNU1-94P-201ENST00000362627 173 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP28-201ENST00000363841 119 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP479-201ENST00000364858 117 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 SNORD96B-201ENST00000386148 79 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 SNORA68.2-201ENST00000391263 128 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP317-201ENST00000410176 116 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP36-201ENST00000410197 133 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 MIR1911-201ENST00000410783 80 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP311-201ENST00000411290 116 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 COX6CP15-201ENST00000426313 211 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 CEACAMP1-201ENST00000434624 1035 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 CASP3P1-201ENST00000446037 609 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC114755.5-201ENST00000447760 831 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RPL23AP81-201ENST00000455252 467 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 PSMC1P13-201ENST00000458195 985 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC090013.1-201ENST00000485147 480 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP315-201ENST00000516340 116 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP312-201ENST00000517068 116 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC007224.1-201ENST00000564410 144 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC006116.5-201ENST00000591936 559 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AL591034.3-201ENST00000605511 685 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC010857.1-201ENST00000606398 594 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms