Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 OR52B1P-201ENST00000316506 909 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 RNU6-560P-201ENST00000364007 108 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 RN7SKP15-201ENST00000364742 309 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 RNU6-1293P-201ENST00000384077 107 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 MIR143-201ENST00000385300 106 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 RNU6-1300P-201ENST00000391046 108 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 DSTNP4-201ENST00000399472 474 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 RN7SKP293-201ENST00000411389 296 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 OR2X1P-201ENST00000421144 687 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC002504.1-201ENST00000438281 691 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC005410.1-202ENST00000460347 485 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 RN7SL189P-201ENST00000468631 289 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC011979.1-201ENST00000472300 483 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC011037.1-201ENST00000483964 558 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 PPIAP19-201ENST00000486414 492 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC118282.1-201ENST00000506408 765 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC025674.1-201ENST00000507074 324 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC109471.1-201ENST00000511631 612 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC092593.2-201ENST00000513866 913 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC112191.2-201ENST00000522428 333 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AL161713.1-201ENST00000555538 145 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 MTND4P33-201ENST00000556706 766 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC015720.2-201ENST00000567709 334 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC098935.2-201ENST00000604222 466 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AL118522.2-201ENST00000616045 615 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 RNU6-156P-201ENST00000621869 107 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 AC073869.10-201ENST00000642016 354 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 MFSD8-220ENST00000641243 1422 ntBASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB16Q9NRJ7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 RNA5SP319-201ENST00000362768 119 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 RNA5SP435-201ENST00000364044 108 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AC019155.1-201ENST00000382242 574 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 SNORA17A-201ENST00000391185 133 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AL031985.1-201ENST00000392713 418 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 RPS3AP9-201ENST00000417027 792 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 RPL7P44-201ENST00000424827 742 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AC234779.1-201ENST00000425910 285 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AL662874.1-201ENST00000426065 230 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 RPP40P1-201ENST00000426762 456 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 NPM1P34-201ENST00000428821 893 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 HMGB3P5-201ENST00000428894 612 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 SEPT7P5-201ENST00000434048 306 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 HMGB3P9-201ENST00000441799 583 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AC064862.4-201ENST00000442180 334 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 HMGN1P36-201ENST00000446623 298 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AC004022.1-201ENST00000447766 1066 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 AC144530.1-201ENST00000452862 555 ntBASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHB16Q9NRJ7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms