Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NLRC4Q9NPP4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NLRC4Q9NPP4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NLRC4Q9NPP4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NLRC4Q9NPP4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 SNORA66-201ENST00000384792 133 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AL450992.3-201ENST00000413192 568 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 MOB1AP1-201ENST00000430903 535 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AL389915.2-201ENST00000454576 441 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC005410.1-202ENST00000460347 485 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC018638.3-201ENST00000461273 132 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC097484.1-201ENST00000471148 389 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 HMGN2P25-201ENST00000486956 268 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC011352.3-201ENST00000505162 593 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 ATP5LP3-201ENST00000514223 304 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 RN7SKP265-201ENST00000516448 223 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 RNA5SP135-201ENST00000517019 125 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 OR5M2P-201ENST00000529003 936 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 OR4C2P-201ENST00000530855 1064 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 MIR3912-201ENST00000577566 105 ntBASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NLRC4Q9NPP4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 SALL4P2-201ENST00000423288 2910 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 AC008079.2-201ENST00000623543 20396 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 ECM1P2-201ENST00000503354 1577 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 MTND4P8-201ENST00000514997 1362 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 ZNF652P1-201ENST00000442420 1309 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 SNORA51.1-201ENST00000363243 140 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 snoZ40.1-201ENST00000364540 72 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 RNU6-636P-201ENST00000384598 107 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 SNORA40.2-201ENST00000390847 128 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 AL078599.1-201ENST00000402075 293 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 AL391361.1-201ENST00000405580 489 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 MIR1286-201ENST00000408112 78 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 MIR1271-201ENST00000408537 86 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 SETP15-201ENST00000412724 337 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 DPRXP1-201ENST00000426312 460 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 RHOT1P3-201ENST00000436571 331 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 KNOP1P3-201ENST00000446933 426 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 AURKAPS1-201ENST00000451805 1212 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 RPS18P6-201ENST00000476880 458 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 VPS26AP1-201ENST00000483197 979 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 MTCO3P35-201ENST00000485582 781 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 AC084024.2-201ENST00000503480 791 ntBASIC5.34□□□□□ -1.55
NLRC4Q9NPP4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms