Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC010201.1-201ENST00000605051 540 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC135507.1-201ENST00000607214 561 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AL451049.1-201ENST00000608672 497 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 PART1_2.1-201ENST00000612397 250 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC092184.1-201ENST00000625042 715 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC073869.7-201ENST00000640874 297 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SALL3Q9BXA9 AC097063.1-201ENST00000426714 1797 ntBASIC5.63□□□□□ -1.51
SALL3Q9BXA9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 RNU4-68P-201ENST00000364314 141 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 RNA5SP397-201ENST00000391323 118 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 SEPT7P8-201ENST00000413308 775 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 RAD23BP1-201ENST00000421404 1227 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 USP9YP9-201ENST00000429406 715 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 MTND4P6-201ENST00000438297 472 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 SEPT7P3-201ENST00000455017 621 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 RN7SKP46-201ENST00000515942 234 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 MTCYBP20-201ENST00000524239 1129 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AC087373.1-201ENST00000524920 491 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AL159169.2-201ENST00000610061 1269 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AL360219.1-201ENST00000610230 366 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 MIR6891-201ENST00000618788 93 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 AC015813.6-201ENST00000624409 5808 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 OR51H2P-202ENST00000641424 3046 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 CPHL1P-201ENST00000461341 3407 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 ZNF90P1-201ENST00000480493 1951 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 MTCO1P7-201ENST00000419523 1542 ntBASIC5.62□□□□□ -1.51
SALL3Q9BXA9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SALL3Q9BXA9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 RNU6-1214P-201ENST00000363650 109 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 EI24P3-201ENST00000399046 1062 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 RPA2P2-201ENST00000419698 796 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC093422.3-201ENST00000428506 305 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 PRELID3BP10-201ENST00000431957 584 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AL049745.1-201ENST00000433953 286 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 PTGES3P5-201ENST00000455109 434 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 ATG12P2-201ENST00000456830 416 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 RPL6P9-201ENST00000466502 859 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 RPS3AP22-201ENST00000488297 769 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 CEACAMP10-202ENST00000495431 496 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC010306.1-201ENST00000523223 1117 ntBASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.61□□□□□ -1.51
SALL3Q9BXA9 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms