Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC015813.4-201ENST00000610469 179 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AC005962.2-201ENST00000611427 652 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AC083809.1-201ENST00000615051 472 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AL138721.1-201ENST00000616756 179 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 MIR6810-201ENST00000622701 70 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AP006248.2-201ENST00000623309 592 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 MIR6830-201ENST00000636015 70 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 MIR6715B-201ENST00000637172 77 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC017104.4-201ENST00000636283 1592 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 RNU1-20P-201ENST00000363314 162 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 RNU6-819P-201ENST00000364116 107 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AL049693.1-201ENST00000402760 611 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AL035696.2-201ENST00000407941 709 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 RAB28P1-201ENST00000411517 641 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AL157831.1-201ENST00000426134 473 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC007563.3-201ENST00000433233 371 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 Z99127.2-201ENST00000441426 334 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 ARL4AP3-201ENST00000441452 574 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 RPS20P4-201ENST00000461659 355 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC021205.1-201ENST00000468797 348 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 UQCRHP4-201ENST00000471686 272 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 RN7SL41P-201ENST00000476144 297 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 METTL15P1-201ENST00000481421 1045 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC138701.1-201ENST00000524329 714 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 TVP23BP1-201ENST00000557500 617 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 MIR3939-201ENST00000582614 106 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 MIR3138-201ENST00000585238 82 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC008759.1-201ENST00000589783 983 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC005034.4-201ENST00000603612 899 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AC007546.1-201ENST00000619452 559 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AL445363.3-201ENST00000623080 671 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 AL133412.1-201ENST00000380194 2992 ntBASIC4.44□□□□□ -1.7
RPRD1AQ96P16 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
RPRD1AQ96P16 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 RNA5SP513-201ENST00000364648 118 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 RNA5SP36-201ENST00000410197 133 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 UBTFL3-201ENST00000418934 1024 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 RWDD4P2-201ENST00000426392 563 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC009963.2-201ENST00000453431 138 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 RN7SL385P-201ENST00000468873 276 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC010618.1-201ENST00000469924 477 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 UBTFL6-201ENST00000477929 1024 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC041039.1-201ENST00000485656 536 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 RWDD4P1-201ENST00000488019 565 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 DEFB109F-201ENST00000491870 277 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC091167.1-201ENST00000492017 396 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 PRELID3BP7-201ENST00000503606 469 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 CDH12P2-201ENST00000504393 298 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC108475.1-201ENST00000507880 950 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC021146.7-201ENST00000509604 775 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC018797.3-201ENST00000513388 1241 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 RN7SKP122-201ENST00000515923 296 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 RNA5SP49-201ENST00000516450 115 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC011477.5-201ENST00000586571 259 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AL139286.1-201ENST00000604465 483 ntBASIC4.43□□□□□ -1.7
RPRD1AQ96P16 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RPRD1AQ96P16 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms