Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 MIR3944-201ENST00000581277 108 ntBASIC5.64□□□□□ -1.51
CCDC7Q96M83 MIR4433B-201ENST00000581329 102 ntBASIC5.64□□□□□ -1.51
CCDC7Q96M83 AC012417.1-201ENST00000582307 1039 ntBASIC5.64□□□□□ -1.51
CCDC7Q96M83 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 AL139395.1-201ENST00000603662 160 ntBASIC5.64□□□□□ -1.51
CCDC7Q96M83 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC7Q96M83 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC7Q96M83 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC7Q96M83 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 AL078595.2-201ENST00000605309 1780 ntBASIC5.63□□□□□ -1.51
CCDC7Q96M83 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC7Q96M83 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC7Q96M83 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 AC027290.2-201ENST00000623210 18662 ntBASIC5.63□□□□□ -1.51
CCDC7Q96M83 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC7Q96M83 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 AC244033.1-201ENST00000426826 870 ntBASIC5.63□□□□□ -1.51
CCDC7Q96M83 AL035246.1-201ENST00000433554 1255 ntBASIC5.63□□□□□ -1.51
CCDC7Q96M83 AL353748.1-201ENST00000440753 474 ntBASIC5.63□□□□□ -1.51
CCDC7Q96M83 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 RPS11P1-201ENST00000451072 473 ntBASIC5.63□□□□□ -1.51
CCDC7Q96M83 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 AC067931.1-201ENST00000624190 671 ntBASIC5.63□□□□□ -1.51
CCDC7Q96M83 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC7Q96M83 USP9YP4-201ENST00000424401 1745 ntBASIC5.63□□□□□ -1.51
CCDC7Q96M83 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC7Q96M83 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC7Q96M83 AC016588.2-201ENST00000632484 3021 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 CASC19-261ENST00000641853 1638 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC7Q96M83 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC7Q96M83 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC7Q96M83 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC7Q96M83 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC7Q96M83 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC7Q96M83 RNU6-761P-201ENST00000384148 107 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 SNORA3C-201ENST00000408792 125 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 AC092447.2-201ENST00000435487 669 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC7Q96M83 AC073587.1-201ENST00000447093 876 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC7Q96M83 RPL38P1-201ENST00000460914 211 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC7Q96M83 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC7Q96M83 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC7Q96M83 YPEL5P3-201ENST00000547227 352 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 HSPE1P5-201ENST00000561489 272 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 MIR5685-201ENST00000579080 79 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC7Q96M83 CR392039.5-201ENST00000623201 510 ntBASIC5.62□□□□□ -1.51
CCDC7Q96M83 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC7Q96M83 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 AL627171.1-201ENST00000618845 1308 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC7Q96M83 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC7Q96M83 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC7Q96M83 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 RNA5SP387-201ENST00000364226 106 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 HMGB3P19-201ENST00000403971 560 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 AL050321.1-201ENST00000432363 400 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 AC083863.1-201ENST00000438811 231 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 TPTE2P3-201ENST00000441562 1189 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 AC010469.1-201ENST00000463864 576 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 RPL5P30-201ENST00000465511 891 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 AC022616.2-201ENST00000523185 300 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 AC110743.1-201ENST00000584870 478 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 AC112230.1-201ENST00000604342 547 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 MIR6868-201ENST00000611215 58 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 AC015722.2-201ENST00000622210 551 ntBASIC5.61□□□□□ -1.51
CCDC7Q96M83 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC7Q96M83 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC7Q96M83 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms