Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 POLR2KP1-201ENST00000553226 168 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 DPRXP4-201ENST00000578053 568 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC090616.2-202ENST00000584248 222 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 MIR3936-201ENST00000584304 110 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 VN1R88P-201ENST00000596787 292 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC104687.2-201ENST00000604442 342 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC090246.1-201ENST00000616499 426 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 MIR6837-201ENST00000620884 64 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AL731566.1-201ENST00000620490 1937 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AL390862.1-201ENST00000635467 1469 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 SNORA17.1-201ENST00000362945 126 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 MIR137-201ENST00000385223 102 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 U3.25-201ENST00000391209 220 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC005522.1-201ENST00000395416 346 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 SNORA11C-201ENST00000408532 129 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 GNG5P5-201ENST00000420444 220 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 OR52B5P-201ENST00000435337 951 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 ISCA1P2-201ENST00000438679 421 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 ARAFP2-201ENST00000440565 559 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 RPL23AP76-201ENST00000441860 458 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC079776.3-201ENST00000450665 370 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 RPS27AP8-201ENST00000452665 445 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 RPL21P134-201ENST00000453468 483 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 MTND4LP3-201ENST00000468320 276 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 BZW1P2-201ENST00000473537 826 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 GAPDHP39-201ENST00000481866 979 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AL136038.1-201ENST00000497246 351 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC104109.1-201ENST00000498563 436 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC024558.1-201ENST00000505008 528 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 FTH1P11-201ENST00000517577 551 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 IGLVIV-64-201ENST00000518581 301 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 MTCO1P49-201ENST00000523429 802 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 OR8A2P-201ENST00000528631 952 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC011453.2-201ENST00000603737 729 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 DUXAP11-201ENST00000603858 526 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 IMMP1LP3-201ENST00000604197 224 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC069545.1-201ENST00000605671 358 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC090425.2-201ENST00000608818 501 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC072039.2-201ENST00000608883 439 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC090116.1-201ENST00000615679 446 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AC073530.2-201ENST00000623987 261 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 MIR4278-201ENST00000636094 69 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 OR52B5P-202ENST00000641118 1110 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms