Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNED1Q8TER0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SNED1Q8TER0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC024560.2-201ENST00000507981 1497 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNED1Q8TER0 PTMAP5-201ENST00000393073 333 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 RN7SKP156-201ENST00000410308 342 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC008280.1-201ENST00000418851 412 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 UBTFL3-201ENST00000418934 1024 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 PTP4A1P1-201ENST00000420539 515 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 RPL23AP25-201ENST00000430973 463 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 RPS4XP4-201ENST00000443195 763 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNED1Q8TER0 VN1R48P-201ENST00000448149 1036 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 OR52Y1P-201ENST00000452418 828 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 UBTFL6-201ENST00000477929 1024 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC108145.1-201ENST00000503770 153 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC026782.2-201ENST00000510845 636 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 SCARNA14-201ENST00000516903 136 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC096553.1-201ENST00000605169 829 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 AC096577.2-201ENST00000611455 153 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNED1Q8TER0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SNED1Q8TER0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SNED1Q8TER0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNED1Q8TER0 CUL4AP1-201ENST00000514750 1863 ntBASIC5.01□□□□□ -1.61
SNED1Q8TER0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNED1Q8TER0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5□□□□□ -1.61
SNED1Q8TER0 AC005261.6-201ENST00000623072 1387 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SNED1Q8TER0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 MIR7-3-201ENST00000384898 110 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 VDAC1P9-201ENST00000412766 841 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5□□□□□ -1.61
SNED1Q8TER0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 SFR1P2-201ENST00000421841 730 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5□□□□□ -1.61
SNED1Q8TER0 SNRPFP2-201ENST00000440710 251 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 ABCF2P2-201ENST00000450549 296 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5□□□□□ -1.61
SNED1Q8TER0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5□□□□□ -1.61
SNED1Q8TER0 OR9M1P-201ENST00000459641 921 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5□□□□□ -1.61
SNED1Q8TER0 RPL7P1-201ENST00000468161 747 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 RPL7P9-201ENST00000468715 747 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 ACTR3BP4-201ENST00000503033 1244 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5□□□□□ -1.61
SNED1Q8TER0 RN7SKP141-201ENST00000516167 338 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 NDUFA5P2-201ENST00000519723 344 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5□□□□□ -1.61
SNED1Q8TER0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5□□□□□ -1.61
SNED1Q8TER0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5□□□□□ -1.61
SNED1Q8TER0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
SNED1Q8TER0 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5□□□□□ -1.61
SNED1Q8TER0 AC004223.2-201ENST00000590309 544 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5□□□□□ -1.61
SNED1Q8TER0 AC087468.1-201ENST00000604365 630 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 SNORD91B-202ENST00000608459 222 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AC109809.1-201ENST00000619665 545 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 AC097520.1-201ENST00000624435 385 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 HPVC1-201ENST00000629899 1198 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SNED1Q8TER0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 ERCC6-202ENST00000374127 1782 ntBASIC5□□□□□ -1.61
SNED1Q8TER0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5□□□□□ -1.61
SNED1Q8TER0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SNED1Q8TER0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
SNED1Q8TER0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SNED1Q8TER0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNED1Q8TER0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 RNA5SP22-201ENST00000365393 109 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 MIR183-201ENST00000384958 110 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC007066.1-201ENST00000392902 381 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AL590704.1-201ENST00000402856 794 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AL589994.1-201ENST00000404962 340 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC114814.2-201ENST00000419195 485 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms