Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 BX276092.8-201ENST00000455722 250 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 TRBV5-2-201ENST00000489095 273 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 SAP18P1-201ENST00000512058 390 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 MTCO1P35-201ENST00000515270 228 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AP001880.2-201ENST00000538233 448 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC044913.1-201ENST00000557200 430 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC087465.1-201ENST00000560574 245 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC019322.1-201ENST00000571869 389 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC105254.2-201ENST00000603636 436 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 BNIP3P11-201ENST00000603878 563 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC018638.7-201ENST00000605836 1114 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AP000238.1-201ENST00000608759 426 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AL592148.2-201ENST00000612210 372 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC087821.2-201ENST00000637086 450 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AP000756.2-201ENST00000624168 2567 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 CASC19-284ENST00000642142 1868 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AL031595.2-201ENST00000624215 19071 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 snoZ40.1-201ENST00000364540 72 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 RNA5SP90-201ENST00000364801 99 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 SNORA70F-201ENST00000384142 135 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 Y_RNA.465-201ENST00000384293 102 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 DBIP1-201ENST00000401435 260 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 RPL36AP36-201ENST00000418616 301 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 BX119904.4-201ENST00000424402 301 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AL133477.1-201ENST00000457472 514 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AC079168.1-201ENST00000458741 345 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AC037198.2-201ENST00000478845 733 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AC091544.1-201ENST00000484702 348 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AP002812.1-201ENST00000495378 474 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AC084024.2-201ENST00000503480 791 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 TOMM22P4-201ENST00000511318 336 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 RNU6-1129P-201ENST00000515964 104 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 SEPT10P1-201ENST00000517342 1162 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 PDCL2P2-201ENST00000533651 189 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AC010198.2-201ENST00000550612 259 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 NBEAP1-201ENST00000554452 979 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 MIR3939-201ENST00000582614 106 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 SCARNA15-201ENST00000607520 4325 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 AP003497.2-201ENST00000624220 967 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 CASC19-206ENST00000641028 1430 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 MFSD8-245ENST00000641743 948 ntBASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SMC1BQ8NDV3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms