Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC023575.1-201ENST00000580510 358 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC008759.1-201ENST00000589783 983 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 SLC25A36P1-201ENST00000590111 465 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 KATNBL1P5-201ENST00000605015 517 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC083809.1-201ENST00000615051 472 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AL645927.2-201ENST00000618350 349 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 MIR6810-201ENST00000622701 70 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC017104.4-201ENST00000636283 1592 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 MTND4P26-201ENST00000415971 1359 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC092435.4-201ENST00000623012 4159 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RAD1P1-201ENST00000231383 813 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 Y_RNA.110-201ENST00000363220 99 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RNA5SP366-201ENST00000365454 123 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RPL23AP26-201ENST00000412728 464 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 UBTFL3-201ENST00000418934 1024 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 ARL2BPP3-201ENST00000421226 480 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RPS12P5-201ENST00000423449 371 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 BX119904.1-201ENST00000432026 348 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AL132765.1-201ENST00000434165 553 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC074367.1-201ENST00000438685 1125 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 HMGB3P9-201ENST00000441799 583 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RPS23P7-201ENST00000466210 444 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 UBTFL6-201ENST00000477929 1024 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RPL35P6-201ENST00000490024 372 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC106806.2-201ENST00000509365 500 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RPS27AP18-201ENST00000515536 459 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 MIR3138-201ENST00000585238 82 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC005962.2-201ENST00000611427 652 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 MIR1264-201ENST00000616374 69 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AL138721.1-201ENST00000616756 179 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 MIR7154-201ENST00000620673 73 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 AP006248.3-201ENST00000623580 594 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 CFTRP2-201ENST00000634304 199 ntBASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
C9orf40Q8IXQ3 CASC19-284ENST00000642142 1868 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 MIR448-201ENST00000362131 111 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 SNORA62-201ENST00000365493 153 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 RNU6-244P-201ENST00000391028 104 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 SNORD66.1-201ENST00000391230 76 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 OR6C69P-201ENST00000394268 893 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 RNA5SP36-201ENST00000410197 133 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 RN7SKP222-201ENST00000410651 315 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 COX6CP17-201ENST00000421389 185 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 MORF4L1P7-201ENST00000426038 703 ntBASIC3.98□□□□□ -1.77
C9orf40Q8IXQ3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms