Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AL356276.2-201ENST00000435919 558 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC015983.1-201ENST00000441577 373 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 RPL17P49-201ENST00000443728 411 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC099521.1-201ENST00000482557 334 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 RPL38P4-201ENST00000502376 214 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 RNU6-408P-201ENST00000515910 100 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 RNU6-273P-201ENST00000516937 96 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 GTF2IP11-201ENST00000526931 420 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AP003181.2-201ENST00000528941 181 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AL162632.2-201ENST00000553933 399 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC091768.1-201ENST00000609258 930 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC006157.1-201ENST00000611750 366 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 MIR6862-1-201ENST00000613016 70 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 MIR6862-2-201ENST00000614755 70 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AL354950.2-201ENST00000617939 290 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 AC092821.2-201ENST00000545710 2042 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 BRD7P1-201ENST00000557705 1915 ntBASIC6.82□□□□□ -1.32
NPAS3Q8IXF0 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC119744.1-201ENST00000454746 1715 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 SDAD1P2-201ENST00000441308 2028 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 RNU6-462P-201ENST00000362659 105 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 Y_RNA.288-201ENST00000364854 92 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 MIR199B-201ENST00000384849 110 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AL136116.1-201ENST00000403591 381 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC109583.1-201ENST00000432156 268 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 HSFY6P-201ENST00000445573 403 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 MTCO1P42-201ENST00000457379 726 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 Y_RNA.661-201ENST00000516003 99 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 RNU2-53P-201ENST00000516257 147 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 RPL21P7-201ENST00000557463 483 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC106785.4-201ENST00000569492 412 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 RN7SL208P-201ENST00000577964 296 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 SNORA70D-201ENST00000578836 135 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 RPSAP75-201ENST00000605848 301 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AL136097.3-201ENST00000611097 505 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC073488.6-201ENST00000632293 754 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC063952.1-203ENST00000634410 658 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 LINC02495-203ENST00000636704 242 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 MTCO1P14-201ENST00000441695 1559 ntBASIC6.81□□□□□ -1.32
NPAS3Q8IXF0 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms