Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC109327.1-201ENST00000471666 403 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 RN7SL817P-201ENST00000480777 288 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 NIP7P2-201ENST00000485801 544 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC069304.1-201ENST00000491593 704 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 RN7SL441P-201ENST00000492388 296 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AL035404.1-201ENST00000497982 568 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 MYL12BP2-201ENST00000503948 512 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC025674.1-201ENST00000507074 324 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC119751.1-201ENST00000513357 765 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC100784.1-201ENST00000522790 310 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC023824.3-201ENST00000569003 562 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC022726.1-201ENST00000587475 207 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 ELOCP34-201ENST00000604436 327 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AL355816.1-201ENST00000607951 118 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC027449.1-201ENST00000608890 407 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC116447.1-201ENST00000613153 453 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AL392048.1-201ENST00000613946 534 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC068787.1-201ENST00000623908 691 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AC011944.2-201ENST00000624440 683 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HERC6Q8IVU3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.26□□□□□ -1.57
HERC6Q8IVU3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AL118496.1-201ENST00000440201 1812 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC120338.1-201ENST00000625074 1541 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC007618.1-201ENST00000366455 732 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 COX5BP7-201ENST00000414780 274 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC009965.2-201ENST00000425328 970 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 COX6CP13-201ENST00000428703 226 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC122718.1-201ENST00000439448 744 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC009263.1-201ENST00000441193 1239 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 FAM133DP-201ENST00000464802 691 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 RPL6P9-201ENST00000466502 859 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 UBE2V1P12-201ENST00000503954 474 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC008837.1-201ENST00000511513 412 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 RNU6-1028P-201ENST00000517164 93 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC084824.1-201ENST00000550917 1005 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 PRPF19P1-201ENST00000584766 898 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC124856.1-201ENST00000600819 896 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC009948.4-201ENST00000604692 675 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC013468.1-201ENST00000608680 598 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 VN1R74P-201ENST00000613259 503 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 AC116563.2-201ENST00000624751 535 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 CDRT1-208ENST00000630868 794 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 OR56B2P-202ENST00000641377 2453 ntBASIC5.25□□□□□ -1.57
HERC6Q8IVU3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HERC6Q8IVU3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC092162.3-201ENST00000624511 1624 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AL445437.1-201ENST00000623157 3087 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms