Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 SNORA73.1-201ENST00000363107 205 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 RNU4-40P-201ENST00000364351 143 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC093719.1-202ENST00000392735 373 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL592291.1-201ENST00000403830 352 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 RNU2-6P-201ENST00000411404 190 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC004690.1-201ENST00000418216 328 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 RPL7L1P9-201ENST00000431298 745 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 RPS29P14-201ENST00000431518 171 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC007327.1-201ENST00000447461 264 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC022431.1-201ENST00000450941 438 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 NECAP1P2-201ENST00000455668 727 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 RPS17P2-201ENST00000461663 408 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC090114.3-201ENST00000479267 829 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC010350.1-201ENST00000504908 231 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC118282.2-201ENST00000508739 374 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 TCP11X3P-202ENST00000514289 1254 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 RNU5A-4P-201ENST00000516588 111 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC022662.1-201ENST00000580252 331 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 TUSC7.1-201ENST00000610969 165 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC107075.1-201ENST00000613695 314 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC112694.2-201ENST00000623697 768 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC016717.3-201ENST00000624730 554 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 SCN1A-220ENST00000641603 12506 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 MAPK10-286ENST00000641208 8747 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC012321.1-201ENST00000561622 1588 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 RNA5SP183-201ENST00000362452 119 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 SNORD113-6-201ENST00000363345 75 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 RNA5SP132-201ENST00000364725 118 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 MIR1282-201ENST00000408865 101 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 RGS17P1-201ENST00000423358 553 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 RPL21P43-201ENST00000425440 472 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 SETP8-201ENST00000435341 628 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 GTF2IP7-202ENST00000436677 309 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AL031663.1-201ENST00000437445 219 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 COX7BP2-201ENST00000437976 242 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 UBE2V1P5-201ENST00000440070 405 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 MTND2P22-201ENST00000444325 1033 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 EXTL2P1-201ENST00000446218 416 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AL354714.3-201ENST00000447284 493 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC023141.9-201ENST00000458734 412 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC108751.2-201ENST00000469993 231 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC011979.1-201ENST00000472300 483 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 GAPDHP39-201ENST00000481866 979 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms