Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL390816.3-201ENST00000604527 1066 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 NPM1P25-201ENST00000429734 854 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 CCRL1P1-201ENST00000449542 1053 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 AL139089.1-201ENST00000620372 975 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 SNORA71B-202ENST00000439232 272 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 RSL24D1P3-201ENST00000449255 495 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 SNORA70.18-201ENST00000516696 98 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 AC119744.1-201ENST00000454746 1715 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 HSPA8P17-201ENST00000427029 1382 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 RPL5P12-201ENST00000477071 851 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 HMGN1P11-201ENST00000508668 303 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 CYCSP28-201ENST00000534284 321 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 MIR5186-201ENST00000577504 120 ntBASIC3.1□□□□□ -1.91
VPS13CQ709C8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS13CQ709C8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS13CQ709C8 RNA5SP267-201ENST00000364893 126 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 UBE2V1P2-201ENST00000397758 440 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 AC245054.1-201ENST00000420944 258 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 UBE2NP1-201ENST00000545592 458 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 CR383656.14-201ENST00000551951 406 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 MTCO1P24-201ENST00000515438 1558 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 SAMMSON-213ENST00000641336 1521 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VPS13CQ709C8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VPS13CQ709C8 AC067945.1-201ENST00000342609 618 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 PGBD4P8-201ENST00000412993 562 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 Z97055.1-201ENST00000419730 712 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 AL645931.1-201ENST00000439737 410 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 TMED11P-201ENST00000479478 690 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 AC138409.2-202ENST00000507274 458 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 AC063950.1-201ENST00000552036 308 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 AL451044.1-201ENST00000604867 238 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 AC093535.2-201ENST00000624769 2326 ntBASIC3.09□□□□□ -1.91
VPS13CQ709C8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS13CQ709C8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
VPS13CQ709C8 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
VPS13CQ709C8 HSPD1P14-201ENST00000432666 1618 ntBASIC3.09□□□□□ -1.92
VPS13CQ709C8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 PEX12P1-201ENST00000400284 1048 ntBASIC3.09□□□□□ -1.92
VPS13CQ709C8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 RPS23P10-201ENST00000416185 486 ntBASIC3.09□□□□□ -1.92
VPS13CQ709C8 RAC1P2-201ENST00000511164 579 ntBASIC3.09□□□□□ -1.92
VPS13CQ709C8 RNA5SP303-201ENST00000516192 130 ntBASIC3.09□□□□□ -1.92
VPS13CQ709C8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 NPM1P5-201ENST00000557228 838 ntBASIC3.09□□□□□ -1.92
VPS13CQ709C8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.09□□□□□ -1.92
VPS13CQ709C8 AC243654.2-201ENST00000612843 443 ntBASIC3.09□□□□□ -1.92
VPS13CQ709C8 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
VPS13CQ709C8 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms