Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 Vault.1-201ENST00000516474 102 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 NDUFB4P11-201ENST00000560510 395 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 ADAD1P2-201ENST00000588476 646 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC009948.4-201ENST00000604692 675 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC000068.2-201ENST00000608816 460 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC068870.2-201ENST00000620635 389 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 MIR6719-201ENST00000622428 87 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC004943.3-201ENST00000624116 600 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC025263.3-201ENST00000622965 1396 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RNA5SP335-201ENST00000363817 110 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RNU6-1243P-201ENST00000364028 107 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RNU6-354P-201ENST00000383862 107 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RNU6-610P-201ENST00000384264 107 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RNU6-1151P-201ENST00000384684 107 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 ENSAP1-201ENST00000392855 326 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC069218.2-201ENST00000411665 344 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AL390774.1-201ENST00000411924 246 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 GSTM5P1-201ENST00000434751 660 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC234064.1-201ENST00000436312 247 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC002542.1-201ENST00000440683 193 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RPL29P29-201ENST00000448725 423 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RPL5P32-201ENST00000454085 879 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC020890.1-201ENST00000491837 504 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC092045.1-201ENST00000495716 1231 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC020593.1-201ENST00000507399 299 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC007016.1-201ENST00000512110 244 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RNA5SP464-201ENST00000516251 108 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RNA5SP92-201ENST00000516437 110 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC090281.1-201ENST00000523019 276 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 OR6C73P-201ENST00000546432 358 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC004217.3-201ENST00000551552 878 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 BLZF2P-201ENST00000553776 1130 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 MTCYBP28-201ENST00000566728 1132 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 RN7SL52P-201ENST00000584271 284 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC112503.1-201ENST00000608436 391 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 EIF3FP1-201ENST00000613970 806 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 uc_338.32-201ENST00000615087 172 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC009237.17-201ENST00000618111 748 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AC004232.3-201ENST00000622977 525 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 ZNF849P-201ENST00000594711 1566 ntBASIC4.34□□□□□ -1.71
C11orf88Q6PI97 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
C11orf88Q6PI97 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
C11orf88Q6PI97 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AL359922.3-201ENST00000624779 1670 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C11orf88Q6PI97 OR4K17-201ENST00000315543 1032 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 RNU1-85P-201ENST00000364127 164 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 RNA5SP339-201ENST00000390987 122 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 MIR937-201ENST00000401271 86 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 LAP3P1-201ENST00000403648 294 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AC108075.1-201ENST00000424692 529 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AL009174.1-201ENST00000426577 416 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 FABP7P2-201ENST00000429946 379 ntBASIC4.33□□□□□ -1.72
C11orf88Q6PI97 AL512637.2-201ENST00000431287 1256 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms