Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTR9Q6PD62 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTR9Q6PD62 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 RNA5SP175-201ENST00000364275 119 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 AL161909.1-201ENST00000397390 712 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 USP9YP19-201ENST00000412165 485 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 MRPS33P4-201ENST00000434892 317 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 RPL21P133-201ENST00000443666 476 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 AC017099.1-201ENST00000448261 1028 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 AC009963.2-201ENST00000453431 138 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 RPL7P22-201ENST00000466005 733 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 RPL35P6-201ENST00000490024 372 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 AC108475.1-201ENST00000507880 950 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTR9Q6PD62 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 OR7E10P-201ENST00000526420 991 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 CYCSP28-201ENST00000534284 321 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 AC025884.1-201ENST00000556034 378 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 AL121834.1-201ENST00000572284 509 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 AC090948.2-201ENST00000607363 564 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 AC015922.4-201ENST00000612568 690 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 AL353726.1-201ENST00000614041 1000 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 MIR4727-201ENST00000622232 55 ntBASIC5.14□□□□□ -1.59
CTR9Q6PD62 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTR9Q6PD62 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTR9Q6PD62 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CTR9Q6PD62 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTR9Q6PD62 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTR9Q6PD62 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTR9Q6PD62 RNA5SP52-201ENST00000362448 134 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 RNU1-44P-201ENST00000384453 163 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 AL078604.1-201ENST00000404609 466 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 RN7SKP235-201ENST00000410662 305 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC019070.1-201ENST00000415008 1024 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 MTCO1P45-201ENST00000431457 267 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 HMGB3P10-201ENST00000434734 572 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AL512326.1-201ENST00000443050 721 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC243772.1-201ENST00000451620 410 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC093267.1-201ENST00000489176 961 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC108022.1-201ENST00000493466 478 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 IGBP1P5-201ENST00000507524 1000 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 PARP4P3-201ENST00000510265 317 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC090151.1-201ENST00000520784 730 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC005034.4-201ENST00000603612 899 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AC016717.3-201ENST00000624730 554 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 HPVC1-201ENST00000629899 1198 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 CFTRP2-201ENST00000634304 199 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 AP000756.2-201ENST00000624168 2567 ntBASIC5.13□□□□□ -1.59
CTR9Q6PD62 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTR9Q6PD62 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CTR9Q6PD62 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 IQCB2P-201ENST00000401788 1633 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 AMZ2P2-201ENST00000406819 1057 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 RNA5SP36-201ENST00000410197 133 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 RPL6P29-201ENST00000414863 865 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 NANOGP6-201ENST00000429190 847 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 RPL31P20-201ENST00000449593 360 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 EIF4A1P11-201ENST00000451239 222 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 NUTF2P7-201ENST00000453086 375 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 AC010374.1-201ENST00000503762 1237 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.12□□□□□ -1.59
CTR9Q6PD62 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTR9Q6PD62 AC018797.3-201ENST00000513388 1241 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 RNA5SP519-201ENST00000516480 119 ntBASIC5.12□□□□□ -1.59
CTR9Q6PD62 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms