Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.52□□□□□ -1.53
USP39Q53GS9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.52□□□□□ -1.53
USP39Q53GS9 HMGB3P10-201ENST00000434734 572 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC093392.2-201ENST00000450682 337 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 FGF7P6-202ENST00000451282 293 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AL035090.1-201ENST00000454835 332 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC108161.1-201ENST00000461060 402 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC104090.1-201ENST00000506341 1171 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 MTND2P33-201ENST00000506452 1031 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AC113347.3-201ENST00000509113 148 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 FABP5P5-201ENST00000515537 406 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 RNA5SP228-201ENST00000516232 133 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 RNU6-528P-201ENST00000516926 100 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.52□□□□□ -1.53
USP39Q53GS9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC084757.1-201ENST00000559987 490 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AADACP1-206ENST00000561502 1193 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.52□□□□□ -1.53
USP39Q53GS9 MTND1P15-201ENST00000579262 949 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 H3F3BP2-201ENST00000583907 357 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC128687.1-201ENST00000605304 619 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AC004067.1-201ENST00000608733 700 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC026368.1-201ENST00000614934 690 ntBASIC5.52□□□□□ -1.53
USP39Q53GS9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.52□□□□□ -1.53
USP39Q53GS9 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.52□□□□□ -1.53
USP39Q53GS9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP39Q53GS9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP39Q53GS9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.52□□□□□ -1.53
USP39Q53GS9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP39Q53GS9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP39Q53GS9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.52□□□□□ -1.53
USP39Q53GS9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.52□□□□□ -1.53
USP39Q53GS9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
USP39Q53GS9 NXF4-202ENST00000416098 1465 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
USP39Q53GS9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP39Q53GS9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.51□□□□□ -1.53
USP39Q53GS9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP39Q53GS9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP39Q53GS9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.51□□□□□ -1.53
USP39Q53GS9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
USP39Q53GS9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
USP39Q53GS9 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP39Q53GS9 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
USP39Q53GS9 RN7SKP185-201ENST00000362813 326 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 Y_RNA.192-201ENST00000363977 102 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 RNU6-1200P-201ENST00000384162 107 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 Y_RNA.465-201ENST00000384293 102 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 RNU6-1263P-201ENST00000384601 106 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 RNU1-149P-201ENST00000390870 161 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 DUTP5-201ENST00000406790 469 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 U3.36-201ENST00000408418 213 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.51□□□□□ -1.53
USP39Q53GS9 RPS27AP7-201ENST00000422792 455 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 AC009784.1-201ENST00000426484 460 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 MTND1P2-201ENST00000430604 821 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 AC005189.1-201ENST00000431286 310 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.51□□□□□ -1.53
USP39Q53GS9 AC138761.5-201ENST00000433967 325 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.51□□□□□ -1.53
USP39Q53GS9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP39Q53GS9 PSMD10P3-201ENST00000437000 448 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.51□□□□□ -1.53
USP39Q53GS9 TPMTP4-201ENST00000450749 678 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 TPT1P7-201ENST00000458300 517 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP39Q53GS9 AC096751.1-202ENST00000502691 1067 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.51□□□□□ -1.53
USP39Q53GS9 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.51□□□□□ -1.53
USP39Q53GS9 MTATP6P22-201ENST00000507369 598 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 AC093281.2-201ENST00000510153 597 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 AC097486.1-201ENST00000515331 210 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 RNU6-405P-201ENST00000516637 110 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.51□□□□□ -1.53
USP39Q53GS9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.51□□□□□ -1.53
USP39Q53GS9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.51□□□□□ -1.53
USP39Q53GS9 AP001317.1-201ENST00000531194 960 ntBASIC5.51□□□□□ -1.53
USP39Q53GS9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
USP39Q53GS9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.51□□□□□ -1.53
USP39Q53GS9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms