Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL935212.3-201ENST00000450729 284 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 MRPL35P4-201ENST00000453682 566 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 RNA5SP103-201ENST00000459503 118 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AP000942.1-201ENST00000463969 747 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC113347.3-201ENST00000509113 148 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL358913.1-201ENST00000554342 121 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AADACP1-206ENST00000561502 1193 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL031320.1-201ENST00000604177 357 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC080013.3-201ENST00000606839 578 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AP005137.2-201ENST00000609238 400 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AP000255.1-201ENST00000610276 676 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 TUSC7.1-201ENST00000610969 165 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AL592148.2-201ENST00000612210 372 ntBASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A4Q53GD3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 Z98755.1-201ENST00000407015 1384 ntBASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SLC44A4Q53GD3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 DDX18P4-201ENST00000511690 1966 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC017079.1-201ENST00000333650 415 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 RN7SKP95-201ENST00000362860 303 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 Y_RNA.169-201ENST00000363745 96 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 RNU6-317P-201ENST00000384031 107 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 SFR1P1-201ENST00000403720 688 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AL133482.1-201ENST00000415988 498 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 DDX39BP1-205ENST00000422507 192 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 OR10T1P-201ENST00000424327 947 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 RPL34P6-201ENST00000432390 345 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 TXNP5-201ENST00000441043 315 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 MRPL42P4-201ENST00000453267 443 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 SEPT7P3-201ENST00000455017 621 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 RN7SKP260-201ENST00000516907 149 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC021006.3-201ENST00000530771 192 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC090695.1-201ENST00000561269 1222 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AGGF1P6-201ENST00000569213 976 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 MIR4270-201ENST00000581799 70 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 RN7SL356P-201ENST00000582228 248 ntBASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC44A4Q53GD3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms