Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 RNU6-657P-201ENST00000383904 107 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 RNY3P10-201ENST00000384764 102 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 U3.23-201ENST00000391132 200 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 DSTNP4-201ENST00000399472 474 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC009804.1-201ENST00000400949 179 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AL078604.1-201ENST00000404609 466 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 Y_RNA.619-201ENST00000410951 90 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AL663109.1-201ENST00000411498 844 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC005033.1-201ENST00000428904 813 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC019185.1-201ENST00000442718 389 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AL163193.1-201ENST00000444895 788 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AL645937.3-201ENST00000453647 936 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 CFTRP1-201ENST00000456646 183 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC090638.1-201ENST00000498296 909 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC008638.1-201ENST00000506035 866 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 snoU109.5-201ENST00000516231 132 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 DEFB131D-201ENST00000526803 184 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC090515.3-201ENST00000560431 315 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AL163952.1-202ENST00000569625 600 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 MIR1269B-201ENST00000580405 75 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 MIR4311-201ENST00000580794 100 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 KPNA2P3-201ENST00000584190 848 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 NF1P5-201ENST00000588287 448 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC006115.2-201ENST00000596823 202 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC116447.1-201ENST00000613153 453 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC243773.3-201ENST00000613270 256 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC010678.1-201ENST00000614118 713 ntBASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC3BQ53EP0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 RNA5SP234-201ENST00000363916 119 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 RNU6-501P-201ENST00000364072 100 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 RNU6-723P-201ENST00000383973 107 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 RNA5SP91-201ENST00000390902 119 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 AC007066.1-201ENST00000392902 381 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 Y_RNA.599-201ENST00000410489 109 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 RPL35AP24-201ENST00000413846 330 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 AL953862.1-201ENST00000423016 168 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 SDCBPP2-201ENST00000424643 885 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 LYPLA1P1-201ENST00000434514 622 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 MTND4P6-201ENST00000438297 472 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 AL512286.1-201ENST00000439244 400 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 TCEA1P3-201ENST00000443005 880 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 COX6CP12-201ENST00000446748 202 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 RPL30P9-201ENST00000465586 330 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 AC092757.1-201ENST00000467293 467 ntBASIC5.7□□□□□ -1.5
FNDC3BQ53EP0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms