Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 OR11H4-201ENST00000315409 1082 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 ATP5F1P2-201ENST00000398143 760 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 TPT1P2-201ENST00000413105 503 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 UBE2V2P1-201ENST00000434717 398 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AL353597.2-202ENST00000434901 373 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 RPS4XP4-201ENST00000443195 763 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC069277.2-201ENST00000454211 432 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 RPS23P7-201ENST00000466210 444 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 RPL7P1-201ENST00000468161 747 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 RPL7P9-201ENST00000468715 747 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 RPL29P14-201ENST00000495837 428 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AP000926.3-201ENST00000497201 299 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 OR51K1P-201ENST00000510214 950 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 RNA5SP154-201ENST00000516193 111 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 IGKV2-38-201ENST00000517443 247 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 HMGB3P26-201ENST00000560051 582 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC012417.1-201ENST00000582307 1039 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AC010608.2-201ENST00000624830 470 ntBASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPN20Q4JDL3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 SNORD35B-201ENST00000363660 87 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 MIR93-201ENST00000385024 80 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AMZ2P2-201ENST00000406819 1057 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 HSPE1P12-201ENST00000412576 301 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 OR2X1P-201ENST00000421144 687 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 C4BPAP2-201ENST00000428434 478 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 MTCO1P54-201ENST00000430139 712 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 ELOCP8-201ENST00000439309 332 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 ELOCP15-201ENST00000442090 332 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 FCF1P7-201ENST00000451185 558 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 SEPT7P6-201ENST00000469999 1143 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AL133372.1-201ENST00000493565 745 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 HPRT1P2-201ENST00000505250 544 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 SNORA31.9-201ENST00000516429 84 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AC068020.1-201ENST00000594215 661 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AC104662.1-201ENST00000604448 511 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AL451044.1-201ENST00000604867 238 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms