Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.8□□□□□ -1.64
NCBP1Q09161 AC009963.2-201ENST00000453431 138 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 C1DP3-201ENST00000455013 423 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 AC105137.1-201ENST00000484355 562 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.8□□□□□ -1.64
NCBP1Q09161 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.8□□□□□ -1.64
NCBP1Q09161 AC010374.1-201ENST00000503762 1237 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 RNU6-319P-201ENST00000516025 108 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.8□□□□□ -1.64
NCBP1Q09161 OR8G5-201ENST00000524943 1041 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.8□□□□□ -1.64
NCBP1Q09161 SNX6P1-201ENST00000601728 1224 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NCBP1Q09161 MIR3653-201ENST00000625572 110 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 BMS1P21-201ENST00000634565 365 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 AL139254.3-201ENST00000641097 674 ntBASIC4.8□□□□□ -1.64
NCBP1Q09161 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCBP1Q09161 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.8□□□□□ -1.64
NCBP1Q09161 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCBP1Q09161 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NCBP1Q09161 AC005261.4-201ENST00000600047 1385 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.79□□□□□ -1.64
NCBP1Q09161 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCBP1Q09161 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCBP1Q09161 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.79□□□□□ -1.64
NCBP1Q09161 RNA5SP322-201ENST00000363617 119 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 RNU4-7P-201ENST00000364758 141 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 RPS26P8-201ENST00000393490 348 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.79□□□□□ -1.64
NCBP1Q09161 MTCYBP7-201ENST00000419540 1134 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AC092647.1-201ENST00000420654 287 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.79□□□□□ -1.64
NCBP1Q09161 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.79□□□□□ -1.64
NCBP1Q09161 RPL23AP38-201ENST00000423801 469 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 MTND4LP13-201ENST00000425022 298 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.79□□□□□ -1.64
NCBP1Q09161 HMGB1P16-201ENST00000447155 540 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 MTND2P25-201ENST00000449028 610 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.79□□□□□ -1.64
NCBP1Q09161 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.79□□□□□ -1.64
NCBP1Q09161 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.79□□□□□ -1.64
NCBP1Q09161 LARP7P4-201ENST00000481075 878 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
NCBP1Q09161 AC091167.1-201ENST00000492017 396 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.79□□□□□ -1.64
NCBP1Q09161 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCBP1Q09161 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.79□□□□□ -1.64
NCBP1Q09161 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.79□□□□□ -1.64
NCBP1Q09161 TVP23BP1-201ENST00000557500 617 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 RPL23AP97-201ENST00000568955 471 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.79□□□□□ -1.64
NCBP1Q09161 AC023813.4-201ENST00000607580 580 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AC078899.5-201ENST00000612475 178 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AL021997.2-201ENST00000615674 271 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 MIR6891-201ENST00000618788 93 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 AC103858.2-201ENST00000621471 543 ntBASIC4.79□□□□□ -1.64
NCBP1Q09161 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.79□□□□□ -1.64
NCBP1Q09161 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
NCBP1Q09161 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NCBP1Q09161 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.79□□□□□ -1.64
NCBP1Q09161 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NCBP1Q09161 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NCBP1Q09161 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCBP1Q09161 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 RNA5SP307-201ENST00000362863 116 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 SNORA70C-201ENST00000384538 135 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.78□□□□□ -1.64
NCBP1Q09161 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NCBP1Q09161 TRIM60P17-201ENST00000415181 719 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 RPEP2-201ENST00000432149 701 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.78□□□□□ -1.64
NCBP1Q09161 AF228730.2-201ENST00000438784 848 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.78□□□□□ -1.64
NCBP1Q09161 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.78□□□□□ -1.64
NCBP1Q09161 AL035551.1-201ENST00000446931 348 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.78□□□□□ -1.64
NCBP1Q09161 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 RPL35P6-201ENST00000490024 372 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.78□□□□□ -1.64
NCBP1Q09161 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 NDUFB4P12-201ENST00000513465 390 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 MIR2114-201ENST00000516645 80 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.78□□□□□ -1.64
NCBP1Q09161 OR5BC1P-201ENST00000529327 739 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
NCBP1Q09161 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.78□□□□□ -1.64
NCBP1Q09161 AL160290.3-201ENST00000604869 165 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 AC007620.3-201ENST00000608131 497 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.78□□□□□ -1.64
NCBP1Q09161 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NCBP1Q09161 AP002967.1-201ENST00000624203 539 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 AP003497.2-201ENST00000624220 967 ntBASIC4.78□□□□□ -1.64
NCBP1Q09161 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NCBP1Q09161 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NCBP1Q09161 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms