Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AC015917.1-201ENST00000579654 510 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH1Q08174 SNORA74.4-201ENST00000607595 199 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AL589743.6-201ENST00000611025 117 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH1Q08174 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
PCDH1Q08174 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.15□□□□□ -1.43
PCDH1Q08174 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDH1Q08174 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH1Q08174 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH1Q08174 AL136984.1-201ENST00000607611 1893 ntBASIC6.15□□□□□ -1.43
PCDH1Q08174 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.15□□□□□ -1.43
PCDH1Q08174 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH1Q08174 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
PCDH1Q08174 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH1Q08174 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDH1Q08174 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDH1Q08174 BIN2P1-201ENST00000504996 1530 ntBASIC6.15□□□□□ -1.43
PCDH1Q08174 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 RNA5SP85-201ENST00000365378 119 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 Y_RNA.394-201ENST00000383942 103 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 SNORA7A-201ENST00000384765 139 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 HMGB1P17-201ENST00000403495 628 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.14□□□□□ -1.43
PCDH1Q08174 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDH1Q08174 UBE2V1P14-201ENST00000415815 558 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 HIGD1AP8-201ENST00000453927 274 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 AC021660.1-201ENST00000465006 554 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 RN7SL413P-201ENST00000482700 297 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDH1Q08174 UBA52P3-201ENST00000491303 382 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 AC010343.2-201ENST00000510162 224 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 AC034159.1-201ENST00000513885 583 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 AC243972.3-201ENST00000539655 198 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 AL389895.1-201ENST00000554127 252 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 MIR3189-201ENST00000578735 73 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.14□□□□□ -1.43
PCDH1Q08174 RN7SL66P-201ENST00000582099 264 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 AC024267.2-201ENST00000582737 417 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 RN7SL475P-201ENST00000583379 298 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 LLPHP1-201ENST00000603571 367 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 AC005261.2-201ENST00000593427 4258 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 NMD3P1-201ENST00000439704 1488 ntBASIC6.14□□□□□ -1.43
PCDH1Q08174 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PCDH1Q08174 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PCDH1Q08174 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH1Q08174 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH1Q08174 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH1Q08174 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PCDH1Q08174 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PCDH1Q08174 Y_RNA.58-201ENST00000362807 102 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 Y_RNA.154-201ENST00000363624 102 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 Y_RNA.157-201ENST00000363638 102 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 RNY3P1-201ENST00000365085 102 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 RNY3-201ENST00000365484 102 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 RNU1-39P-201ENST00000383897 165 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 Y_RNA.490-201ENST00000384413 102 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AL033519.1-201ENST00000407266 307 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC116036.1-201ENST00000412199 367 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC211486.3-201ENST00000412694 621 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 MTCO2P12-201ENST00000427426 682 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH1Q08174 OR51AB1P-201ENST00000429046 620 ntBASIC6.13□□□□□ -1.43
PCDH1Q08174 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.13□□□□□ -1.43
PCDH1Q08174 AC013403.1-201ENST00000436954 263 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms