Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GABPAQ06546 AL445189.1-201ENST00000405722 338 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 RNU6-628P-201ENST00000410675 107 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.87□□□□□ -1.63
GABPAQ06546 OR13Z1P-201ENST00000416141 834 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.87□□□□□ -1.63
GABPAQ06546 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.87□□□□□ -1.63
GABPAQ06546 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.87□□□□□ -1.63
GABPAQ06546 OR8F1P-201ENST00000425243 930 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GABPAQ06546 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.87□□□□□ -1.63
GABPAQ06546 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.87□□□□□ -1.63
GABPAQ06546 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.87□□□□□ -1.63
GABPAQ06546 KRT19P6-201ENST00000510983 209 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.87□□□□□ -1.63
GABPAQ06546 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
GABPAQ06546 IFITM8P-201ENST00000522529 394 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AC012414.2-201ENST00000559474 187 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AC124068.1-201ENST00000563131 678 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AC053481.4-201ENST00000583164 216 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AC006130.2-201ENST00000586202 326 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 MIR6875-201ENST00000617506 72 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AC009032.1-201ENST00000617574 431 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.87□□□□□ -1.63
GABPAQ06546 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.87□□□□□ -1.63
GABPAQ06546 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GABPAQ06546 AC010300.1-201ENST00000600671 5134 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 AC104118.1-201ENST00000607625 1589 ntBASIC4.87□□□□□ -1.63
GABPAQ06546 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
GABPAQ06546 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
GABPAQ06546 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
GABPAQ06546 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
GABPAQ06546 ERCC6-202ENST00000374127 1782 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
GABPAQ06546 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 RN7SKP224-201ENST00000364140 325 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 FAM204CP-201ENST00000424489 642 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.86□□□□□ -1.63
GABPAQ06546 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.86□□□□□ -1.63
GABPAQ06546 MTND2P3-201ENST00000452458 470 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 TPRKBP1-201ENST00000456243 481 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AP002345.1-201ENST00000456493 928 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.86□□□□□ -1.63
GABPAQ06546 LARP7P4-201ENST00000481075 878 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 VN1R105P-201ENST00000486595 910 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AC098799.1-201ENST00000504752 800 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 HPRT1P2-201ENST00000505250 544 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 HMGB1P47-201ENST00000511281 589 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.86□□□□□ -1.63
GABPAQ06546 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.86□□□□□ -1.63
GABPAQ06546 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.86□□□□□ -1.63
GABPAQ06546 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.86□□□□□ -1.63
GABPAQ06546 AC034105.4-201ENST00000568304 277 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AC114878.2-201ENST00000604863 1251 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AL021368.1-201ENST00000607490 540 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AL135786.2-201ENST00000608422 615 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.86□□□□□ -1.63
GABPAQ06546 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.86□□□□□ -1.63
GABPAQ06546 AC006840.1-201ENST00000623069 542 ntBASIC4.86□□□□□ -1.63
GABPAQ06546 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.86□□□□□ -1.63
GABPAQ06546 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GABPAQ06546 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
GABPAQ06546 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.85□□□□□ -1.63
GABPAQ06546 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
GABPAQ06546 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GABPAQ06546 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.85□□□□□ -1.63
GABPAQ06546 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GABPAQ06546 VN1R8P-201ENST00000407739 893 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 HSPE1P12-201ENST00000412576 301 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 AC093084.1-201ENST00000424233 687 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.85□□□□□ -1.63
GABPAQ06546 AL358472.1-201ENST00000431295 329 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.85□□□□□ -1.63
GABPAQ06546 RPL38P1-201ENST00000460914 211 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 RPL7P1-201ENST00000468161 747 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 RPL7P9-201ENST00000468715 747 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 RPL23AP2-201ENST00000471227 466 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 AC020593.1-201ENST00000507399 299 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 ACTR6P1-201ENST00000514311 1104 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 AC008694.2-201ENST00000517591 306 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 AC109635.6-201ENST00000525487 1113 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 AC100770.1-201ENST00000532310 322 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.85□□□□□ -1.63
GABPAQ06546 AC063950.1-201ENST00000552036 308 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 SNRPGP1-201ENST00000553864 222 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 MIR4286-201ENST00000580651 93 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 MIR5684-201ENST00000585074 65 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.85□□□□□ -1.63
GABPAQ06546 AC064801.1-201ENST00000612025 407 ntBASIC4.85□□□□□ -1.63
GABPAQ06546 AL354696.1-201ENST00000614652 497 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms