Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ERCC6-202ENST00000374127 1782 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AC005261.4-201ENST00000600047 1385 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
H3F3AP84243 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AC114546.3-201ENST00000623582 1734 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3AP84243 AC097504.1-201ENST00000515103 2415 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 AC009313.2-201ENST00000417893 1941 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.72□□□□□ -1.81
H3F3AP84243 AC016588.2-201ENST00000632484 3021 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.72□□□□□ -1.81
H3F3AP84243 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 SNORA62-201ENST00000365493 153 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3AP84243 AC068538.1-201ENST00000376856 336 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 RNU6-1279P-201ENST00000383917 103 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 MIR513A2-201ENST00000385249 127 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
H3F3AP84243 RNA5SP105-201ENST00000391123 113 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 AMZ2P2-201ENST00000406819 1057 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 RN7SKP33-201ENST00000410942 340 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3AP84243 TRIM60P17-201ENST00000415181 719 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 DPY19L1P2-201ENST00000426647 915 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3AP84243 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 RPL23AP46-201ENST00000438548 490 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3AP84243 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
H3F3AP84243 RN7SL585P-201ENST00000470538 280 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
H3F3AP84243 AC083829.1-201ENST00000503756 657 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 AC139783.2-201ENST00000504847 1145 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 AC093824.1-201ENST00000508796 343 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 HIGD1AP5-201ENST00000529959 259 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3AP84243 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.72□□□□□ -1.81
H3F3AP84243 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.72□□□□□ -1.81
H3F3AP84243 AC023575.1-201ENST00000580510 358 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 RN7SL600P-201ENST00000581811 299 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 MIR3939-201ENST00000582614 106 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3AP84243 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3AP84243 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3AP84243 AC078899.5-201ENST00000612475 178 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 MIR7151-201ENST00000617477 60 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.72□□□□□ -1.81
H3F3AP84243 AP005264.7-201ENST00000625003 745 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.72□□□□□ -1.81
H3F3AP84243 MIR6830-201ENST00000636015 70 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 MIR6715B-201ENST00000637172 77 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
H3F3AP84243 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
H3F3AP84243 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
H3F3AP84243 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.72□□□□□ -1.81
H3F3AP84243 AL049555.1-201ENST00000562834 1933 ntBASIC3.72□□□□□ -1.81
H3F3AP84243 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.81
H3F3AP84243 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
H3F3AP84243 CYP1D1P-201ENST00000416662 1433 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.71□□□□□ -1.82
H3F3AP84243 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
H3F3AP84243 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 RPS27AP11-201ENST00000402798 447 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.71□□□□□ -1.82
H3F3AP84243 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.71□□□□□ -1.82
H3F3AP84243 RPL23AP38-201ENST00000423801 469 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.71□□□□□ -1.82
H3F3AP84243 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 ELOCP10-201ENST00000440624 327 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.71□□□□□ -1.82
H3F3AP84243 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.71□□□□□ -1.82
H3F3AP84243 RPL36AP13-201ENST00000457490 317 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.71□□□□□ -1.82
H3F3AP84243 AC006517.1-201ENST00000480485 328 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
H3F3AP84243 AC138701.1-201ENST00000524329 714 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 OR5M7P-201ENST00000526140 972 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
H3F3AP84243 AC025884.1-201ENST00000556034 378 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 AC022655.2-201ENST00000577280 318 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 AC069366.1-201ENST00000583159 838 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 ELOCP28-201ENST00000590044 317 ntBASIC3.71□□□□□ -1.82
H3F3AP84243 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.71□□□□□ -1.82
H3F3AP84243 AC005229.3-201ENST00000603438 323 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms