Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC010153.1-201ENST00000432862 727 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 AC023347.2-201ENST00000433994 462 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX6-1P78426 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX6-1P78426 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 RPL26P28-201ENST00000451325 435 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX6-1P78426 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX6-1P78426 USP9YP10-201ENST00000454868 628 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 MTCO2P18-201ENST00000457151 658 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 MTND6P6-201ENST00000478031 263 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 RN7SL184P-201ENST00000488308 297 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 RN7SL30P-201ENST00000488416 306 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 RPL30P11-201ENST00000495304 339 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 ARL4AP1-201ENST00000503220 705 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX6-1P78426 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.04□□□□□ -1.6
NKX6-1P78426 LTV1P1-201ENST00000510683 1237 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 USP9YP5-201ENST00000511770 630 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 AC108043.1-201ENST00000512696 574 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 NDUFA5P2-201ENST00000519723 344 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.04□□□□□ -1.6
NKX6-1P78426 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX6-1P78426 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX6-1P78426 BLZF2P-201ENST00000553776 1130 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX6-1P78426 NPM1P42-201ENST00000560329 862 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX6-1P78426 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX6-1P78426 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX6-1P78426 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX6-1P78426 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX6-1P78426 RNU6-88P-201ENST00000606801 100 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 AP001521.1-201ENST00000609150 300 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.04□□□□□ -1.6
NKX6-1P78426 AC138965.3-201ENST00000623875 498 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 AC231657.1-201ENST00000624313 397 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 AC079228.1-201ENST00000624774 1049 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
NKX6-1P78426 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX6-1P78426 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX6-1P78426 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX6-1P78426 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NKX6-1P78426 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX6-1P78426 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 MAPK10-338ENST00000641647 3362 ntBASIC5.04□□□□□ -1.6
NKX6-1P78426 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
NKX6-1P78426 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NKX6-1P78426 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NKX6-1P78426 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX6-1P78426 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX6-1P78426 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
NKX6-1P78426 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NKX6-1P78426 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX6-1P78426 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX6-1P78426 MFSD8-239ENST00000641590 2479 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 AC138907.8-201ENST00000623981 2256 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 AC235565.1-201ENST00000456962 1325 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX6-1P78426 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX6-1P78426 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX6-1P78426 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX6-1P78426 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX6-1P78426 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX6-1P78426 RNU4-2-201ENST00000365668 141 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NKX6-1P78426 RNU6-178P-201ENST00000384631 104 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 SNORA26.8-201ENST00000391306 124 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX6-1P78426 RPL23AP29-201ENST00000397284 453 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 MIR1286-201ENST00000408112 78 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX6-1P78426 MRPL53P1-201ENST00000414323 319 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 NPM1P11-201ENST00000417106 855 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 MTCYBP38-201ENST00000417160 1123 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX6-1P78426 SDCBPP2-201ENST00000424643 885 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX6-1P78426 RPL7P56-201ENST00000429441 717 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 HMGB3P24-201ENST00000433260 622 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 YWHAZP8-201ENST00000436935 731 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX6-1P78426 AC092427.1-201ENST00000439177 601 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 RPS26P56-201ENST00000444468 240 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX6-1P78426 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX6-1P78426 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NKX6-1P78426 SETP11-201ENST00000473027 690 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 AC093270.2-201ENST00000486157 792 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX6-1P78426 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX6-1P78426 AC231760.1-201ENST00000498002 260 ntBASIC5.03□□□□□ -1.6
NKX6-1P78426 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms