Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LSM6P62312 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LSM6P62312 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.73□□□□□ -1.81
LSM6P62312 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM6P62312 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LSM6P62312 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LSM6P62312 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LSM6P62312 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LSM6P62312 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LSM6P62312 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LSM6P62312 AC017002.4-201ENST00000604721 1525 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AC007685.1-201ENST00000329806 452 ntBASIC3.72□□□□□ -1.81
LSM6P62312 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LSM6P62312 RNA5SP388-201ENST00000362584 119 ntBASIC3.72□□□□□ -1.81
LSM6P62312 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LSM6P62312 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LSM6P62312 AL034374.1-201ENST00000406329 351 ntBASIC3.72□□□□□ -1.81
LSM6P62312 RN7SKP177-201ENST00000410567 355 ntBASIC3.72□□□□□ -1.81
LSM6P62312 RN7SKP235-201ENST00000410662 305 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AC093698.1-201ENST00000423843 571 ntBASIC3.72□□□□□ -1.81
LSM6P62312 TRGV7-201ENST00000427089 353 ntBASIC3.72□□□□□ -1.81
LSM6P62312 FTH1P6-201ENST00000430768 320 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM6P62312 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM6P62312 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.72□□□□□ -1.81
LSM6P62312 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM6P62312 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM6P62312 NDUFA12P1-201ENST00000455914 406 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM6P62312 RPS29P19-201ENST00000479709 171 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AC006517.1-201ENST00000480485 328 ntBASIC3.72□□□□□ -1.81
LSM6P62312 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM6P62312 RN7SL691P-201ENST00000494487 301 ntBASIC3.72□□□□□ -1.81
LSM6P62312 RNU6-347P-201ENST00000516658 105 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM6P62312 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.72□□□□□ -1.81
LSM6P62312 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM6P62312 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM6P62312 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
LSM6P62312 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM6P62312 AC087888.1-201ENST00000550884 1254 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.72□□□□□ -1.81
LSM6P62312 AC068831.4-201ENST00000556118 109 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM6P62312 AL356218.2-201ENST00000605264 187 ntBASIC3.72□□□□□ -1.81
LSM6P62312 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.72□□□□□ -1.81
LSM6P62312 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.72□□□□□ -1.81
LSM6P62312 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM6P62312 RN7SL722P-201ENST00000617780 284 ntBASIC3.72□□□□□ -1.81
LSM6P62312 RN7SL565P-201ENST00000618246 284 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AP005264.7-201ENST00000625003 745 ntBASIC3.72□□□□□ -1.81
LSM6P62312 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM6P62312 AL158163.1-201ENST00000603915 1649 ntBASIC3.72□□□□□ -1.81
LSM6P62312 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
LSM6P62312 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LSM6P62312 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
LSM6P62312 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM6P62312 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LSM6P62312 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LSM6P62312 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LSM6P62312 OR4K17-201ENST00000315543 1032 ntBASIC3.71□□□□□ -1.82
LSM6P62312 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.71□□□□□ -1.82
LSM6P62312 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
LSM6P62312 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LSM6P62312 AL035696.2-201ENST00000407941 709 ntBASIC3.71□□□□□ -1.82
LSM6P62312 MIR1183-201ENST00000408856 89 ntBASIC3.71□□□□□ -1.82
LSM6P62312 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM6P62312 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.71□□□□□ -1.82
LSM6P62312 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LSM6P62312 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM6P62312 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM6P62312 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM6P62312 RPL23AP46-201ENST00000438548 490 ntBASIC3.71□□□□□ -1.82
LSM6P62312 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.71□□□□□ -1.82
LSM6P62312 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM6P62312 AC009963.2-201ENST00000453431 138 ntBASIC3.71□□□□□ -1.82
LSM6P62312 AC021205.1-201ENST00000468797 348 ntBASIC3.71□□□□□ -1.82
LSM6P62312 RPS26P15-201ENST00000488067 348 ntBASIC3.71□□□□□ -1.82
LSM6P62312 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM6P62312 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM6P62312 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM6P62312 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LSM6P62312 KCTD9P2-201ENST00000512203 1013 ntBASIC3.71□□□□□ -1.82
LSM6P62312 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM6P62312 RNA5SP49-201ENST00000516450 115 ntBASIC3.71□□□□□ -1.82
LSM6P62312 IGHV3-63-201ENST00000518422 341 ntBASIC3.71□□□□□ -1.82
LSM6P62312 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM6P62312 UBTFL9-201ENST00000534504 1148 ntBASIC3.71□□□□□ -1.82
LSM6P62312 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM6P62312 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.71□□□□□ -1.82
LSM6P62312 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LSM6P62312 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.71□□□□□ -1.82
LSM6P62312 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM6P62312 AP000346.3-201ENST00000622821 210 ntBASIC3.71□□□□□ -1.82
LSM6P62312 AL445363.3-201ENST00000623080 671 ntBASIC3.71□□□□□ -1.82
LSM6P62312 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM6P62312 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.71□□□□□ -1.82
LSM6P62312 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LSM6P62312 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
LSM6P62312 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms