Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.73□□□□□ -1.81
VBP1P61758 AC104662.1-201ENST00000604448 511 ntBASIC3.73□□□□□ -1.81
VBP1P61758 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.73□□□□□ -1.81
VBP1P61758 AC092653.1-201ENST00000608509 531 ntBASIC3.73□□□□□ -1.81
VBP1P61758 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.73□□□□□ -1.81
VBP1P61758 AL592494.3-201ENST00000609485 464 ntBASIC3.73□□□□□ -1.81
VBP1P61758 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VBP1P61758 AL021997.2-201ENST00000615674 271 ntBASIC3.73□□□□□ -1.81
VBP1P61758 AC008115.4-201ENST00000619780 775 ntBASIC3.73□□□□□ -1.81
VBP1P61758 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.73□□□□□ -1.81
VBP1P61758 AP003072.4-201ENST00000624580 310 ntBASIC3.73□□□□□ -1.81
VBP1P61758 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VBP1P61758 AL592494.2-201ENST00000425455 1548 ntBASIC3.73□□□□□ -1.81
VBP1P61758 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VBP1P61758 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.73□□□□□ -1.81
VBP1P61758 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VBP1P61758 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
VBP1P61758 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VBP1P61758 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.72□□□□□ -1.81
VBP1P61758 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VBP1P61758 HMGB1P13-201ENST00000406019 642 ntBASIC3.72□□□□□ -1.81
VBP1P61758 MIR1179-201ENST00000408703 91 ntBASIC3.72□□□□□ -1.81
VBP1P61758 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.72□□□□□ -1.81
VBP1P61758 AC009263.1-201ENST00000441193 1239 ntBASIC3.72□□□□□ -1.81
VBP1P61758 AURKAPS1-201ENST00000451805 1212 ntBASIC3.72□□□□□ -1.81
VBP1P61758 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.72□□□□□ -1.81
VBP1P61758 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.72□□□□□ -1.81
VBP1P61758 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.72□□□□□ -1.81
VBP1P61758 NPM1P52-201ENST00000518264 846 ntBASIC3.72□□□□□ -1.81
VBP1P61758 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.72□□□□□ -1.81
VBP1P61758 AC005363.1-201ENST00000530779 351 ntBASIC3.72□□□□□ -1.81
VBP1P61758 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.72□□□□□ -1.81
VBP1P61758 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.72□□□□□ -1.81
VBP1P61758 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.72□□□□□ -1.81
VBP1P61758 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.72□□□□□ -1.81
VBP1P61758 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.72□□□□□ -1.81
VBP1P61758 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VBP1P61758 LINC00561-201ENST00000565815 2738 ntBASIC3.72□□□□□ -1.81
VBP1P61758 AC125257.1-201ENST00000560400 2930 ntBASIC3.72□□□□□ -1.81
VBP1P61758 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.72□□□□□ -1.81
VBP1P61758 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.72□□□□□ -1.81
VBP1P61758 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VBP1P61758 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VBP1P61758 MFSD8-216ENST00000641147 4009 ntBASIC3.72□□□□□ -1.81
VBP1P61758 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VBP1P61758 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VBP1P61758 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VBP1P61758 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.71□□□□□ -1.82
VBP1P61758 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VBP1P61758 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VBP1P61758 RPL23P2-201ENST00000320371 421 ntBASIC3.71□□□□□ -1.82
VBP1P61758 RNA5SP175-201ENST00000364275 119 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VBP1P61758 MIR3065-201ENST00000390137 79 ntBASIC3.71□□□□□ -1.82
VBP1P61758 PGBD4P8-201ENST00000412993 562 ntBASIC3.71□□□□□ -1.82
VBP1P61758 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.71□□□□□ -1.82
VBP1P61758 AC007559.1-201ENST00000428736 355 ntBASIC3.71□□□□□ -1.82
VBP1P61758 NPM1P34-201ENST00000428821 893 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AC093716.1-201ENST00000435923 377 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.71□□□□□ -1.82
VBP1P61758 RPS7P5-201ENST00000441482 581 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.71□□□□□ -1.82
VBP1P61758 snoU13.20-201ENST00000459180 104 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AP000893.1-201ENST00000474462 794 ntBASIC3.71□□□□□ -1.82
VBP1P61758 RN7SL717P-201ENST00000478343 297 ntBASIC3.71□□□□□ -1.82
VBP1P61758 RN7SKP276-201ENST00000516242 268 ntBASIC3.71□□□□□ -1.82
VBP1P61758 RN7SKP66-201ENST00000516681 231 ntBASIC3.71□□□□□ -1.82
VBP1P61758 RNU6-1231P-201ENST00000517185 103 ntBASIC3.71□□□□□ -1.82
VBP1P61758 SOX5P1-201ENST00000524155 1127 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.71□□□□□ -1.82
VBP1P61758 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VBP1P61758 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.71□□□□□ -1.82
VBP1P61758 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.71□□□□□ -1.82
VBP1P61758 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.71□□□□□ -1.82
VBP1P61758 AC099489.2-201ENST00000574976 260 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AC020978.7-201ENST00000575953 1187 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.71□□□□□ -1.82
VBP1P61758 AC005726.4-201ENST00000582858 458 ntBASIC3.71□□□□□ -1.82
VBP1P61758 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.71□□□□□ -1.82
VBP1P61758 AC006116.3-201ENST00000592968 361 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.71□□□□□ -1.82
VBP1P61758 AC093765.1-201ENST00000603758 881 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AL354984.3-201ENST00000604803 325 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AP003117.2-201ENST00000606010 545 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.71□□□□□ -1.82
VBP1P61758 MIR6889-201ENST00000613185 59 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AC092628.2-201ENST00000622492 339 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AL512356.3-201ENST00000623005 461 ntBASIC3.71□□□□□ -1.82
VBP1P61758 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.71□□□□□ -1.82
VBP1P61758 AC244205.2-202ENST00000635781 342 ntBASIC3.71□□□□□ -1.82
VBP1P61758 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VBP1P61758 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VBP1P61758 AC024560.2-201ENST00000507981 1497 ntBASIC3.71□□□□□ -1.82
VBP1P61758 AL021368.2-201ENST00000606125 5352 ntBASIC3.71□□□□□ -1.82
VBP1P61758 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VBP1P61758 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
VBP1P61758 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VBP1P61758 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.7□□□□□ -1.82
VBP1P61758 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.7□□□□□ -1.82
VBP1P61758 AL031985.1-201ENST00000392713 418 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms