Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AP005019.3-201ENST00000620418 560 ntBASIC3.8□□□□□ -1.8
CXCR4P61073 AL445528.2-201ENST00000620582 470 ntBASIC3.8□□□□□ -1.8
CXCR4P61073 AC018445.2-201ENST00000622987 260 ntBASIC3.8□□□□□ -1.8
CXCR4P61073 AC004943.3-201ENST00000624116 600 ntBASIC3.8□□□□□ -1.8
CXCR4P61073 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXCR4P61073 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCR4P61073 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCR4P61073 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCR4P61073 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
CXCR4P61073 AC015813.6-201ENST00000624409 5808 ntBASIC3.8□□□□□ -1.8
CXCR4P61073 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXCR4P61073 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CXCR4P61073 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCR4P61073 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCR4P61073 MTND4P10-201ENST00000446199 1363 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CXCR4P61073 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCR4P61073 AC233968.1-201ENST00000611212 1300 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCR4P61073 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCR4P61073 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CXCR4P61073 RNU1-18P-201ENST00000363062 164 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 U3.15-201ENST00000365398 212 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 PGBD4P8-201ENST00000412993 562 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 SMC4P1-201ENST00000414479 527 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 TRGV6-201ENST00000417928 299 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 RPS26P13-201ENST00000419030 330 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCR4P61073 RPL7P61-201ENST00000451721 751 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 FABP3P2-201ENST00000453169 399 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 MTCO3P20-201ENST00000454926 688 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 AC010307.1-201ENST00000467206 836 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 AC010374.1-201ENST00000503762 1237 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CXCR4P61073 RNU6-347P-201ENST00000516658 105 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 RNA5SP73-201ENST00000516744 108 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCR4P61073 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCR4P61073 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCR4P61073 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCR4P61073 OR7E18P-201ENST00000592589 702 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 AC034236.3-201ENST00000605999 461 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 MIR7155-201ENST00000615925 56 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 C2orf27A-204ENST00000623058 969 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 AC008013.2-202ENST00000637965 364 ntBASIC3.79□□□□□ -1.8
CXCR4P61073 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CXCR4P61073 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCR4P61073 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCR4P61073 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CXCR4P61073 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCR4P61073 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCR4P61073 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CXCR4P61073 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCR4P61073 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCR4P61073 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCR4P61073 RPS4XP5-202ENST00000449995 1334 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 SNORA70F-201ENST00000384142 135 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 RNA5SP87-201ENST00000384155 118 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CXCR4P61073 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCR4P61073 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCR4P61073 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCR4P61073 VN1R54P-201ENST00000435210 1049 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCR4P61073 PTMAP6-201ENST00000439110 327 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 AL512326.1-201ENST00000443050 721 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCR4P61073 AL500522.2-201ENST00000448562 343 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 RPL36AP13-201ENST00000457490 317 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 RPL21P126-201ENST00000470049 478 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 RN7SL738P-201ENST00000470264 297 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.78□□□□□ -1.8
CXCR4P61073 AC068305.1-201ENST00000497406 726 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
CXCR4P61073 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CXCR4P61073 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CXCR4P61073 EIF1P6-201ENST00000600054 334 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 AL354984.3-201ENST00000604803 325 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCR4P61073 AC022960.2-201ENST00000616300 666 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCR4P61073 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCR4P61073 AL118496.1-201ENST00000440201 1812 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCR4P61073 AC017002.4-201ENST00000604721 1525 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 AC100871.1-201ENST00000507871 1456 ntBASIC3.78□□□□□ -1.8
CXCR4P61073 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCR4P61073 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.78□□□□□ -1.81
CXCR4P61073 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCR4P61073 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCR4P61073 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCR4P61073 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.77□□□□□ -1.81
CXCR4P61073 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCR4P61073 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCR4P61073 UBE3AP2-201ENST00000429033 2259 ntBASIC3.77□□□□□ -1.81
CXCR4P61073 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCR4P61073 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCR4P61073 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CXCR4P61073 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCR4P61073 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms