Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 MIR378J-201ENST00000611988 109 ntBASIC6.19□□□□□ -1.42
RTP1P59025 uc_338.18-201ENST00000615451 175 ntBASIC6.19□□□□□ -1.42
RTP1P59025 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.19□□□□□ -1.42
RTP1P59025 AL136981.2-201ENST00000617319 734 ntBASIC6.19□□□□□ -1.42
RTP1P59025 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.19□□□□□ -1.42
RTP1P59025 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.19□□□□□ -1.42
RTP1P59025 AC000095.2-202ENST00000637415 154 ntBASIC6.19□□□□□ -1.42
RTP1P59025 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTP1P59025 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTP1P59025 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.19□□□□□ -1.42
RTP1P59025 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RTP1P59025 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RTP1P59025 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTP1P59025 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.18□□□□□ -1.42
RTP1P59025 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
RTP1P59025 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RTP1P59025 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RTP1P59025 AC140479.2-201ENST00000421567 3130 ntBASIC6.18□□□□□ -1.42
RTP1P59025 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 AL137141.1-201ENST00000624622 4836 ntBASIC6.18□□□□□ -1.42
RTP1P59025 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 AL121886.1-201ENST00000358609 435 ntBASIC6.18□□□□□ -1.42
RTP1P59025 RN7SKP6-201ENST00000364795 319 ntBASIC6.18□□□□□ -1.42
RTP1P59025 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.18□□□□□ -1.42
RTP1P59025 RNY3P10-201ENST00000384764 102 ntBASIC6.18□□□□□ -1.42
RTP1P59025 MIR551A-201ENST00000385042 96 ntBASIC6.18□□□□□ -1.42
RTP1P59025 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RTP1P59025 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.18□□□□□ -1.42
RTP1P59025 AL009179.1-201ENST00000406085 265 ntBASIC6.18□□□□□ -1.42
RTP1P59025 BTF3P7-201ENST00000407097 488 ntBASIC6.18□□□□□ -1.42
RTP1P59025 SNORA11-201ENST00000408789 128 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC096921.1-201ENST00000411661 375 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.18□□□□□ -1.42
RTP1P59025 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.18□□□□□ -1.42
RTP1P59025 AC007161.1-204ENST00000423039 460 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.18□□□□□ -1.42
RTP1P59025 MTCO1P3-201ENST00000429327 192 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 AC093155.1-201ENST00000440164 826 ntBASIC6.18□□□□□ -1.42
RTP1P59025 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.18□□□□□ -1.42
RTP1P59025 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.18□□□□□ -1.42
RTP1P59025 AC105399.1-202ENST00000447303 205 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC005002.1-201ENST00000447458 540 ntBASIC6.18□□□□□ -1.42
RTP1P59025 TPT1P13-201ENST00000449760 499 ntBASIC6.18□□□□□ -1.42
RTP1P59025 ELOCP23-201ENST00000452014 332 ntBASIC6.18□□□□□ -1.42
RTP1P59025 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 MTND2P24-201ENST00000453434 806 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AL672167.3-201ENST00000465951 960 ntBASIC6.18□□□□□ -1.42
RTP1P59025 ARL2BPP4-201ENST00000506854 471 ntBASIC6.18□□□□□ -1.42
RTP1P59025 KRT19P6-201ENST00000510983 209 ntBASIC6.18□□□□□ -1.42
RTP1P59025 RNU6-718P-201ENST00000516166 105 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.18□□□□□ -1.42
RTP1P59025 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.18□□□□□ -1.42
RTP1P59025 BRD9P1-201ENST00000529855 560 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.18□□□□□ -1.42
RTP1P59025 AC074029.1-201ENST00000552531 1044 ntBASIC6.18□□□□□ -1.42
RTP1P59025 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 AL049870.4-201ENST00000555741 486 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 AC079075.1-201ENST00000559543 878 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.18□□□□□ -1.42
RTP1P59025 AC114947.2-201ENST00000565748 2125 ntBASIC6.18□□□□□ -1.42
RTP1P59025 TPRKBP2-201ENST00000565969 475 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.18□□□□□ -1.42
RTP1P59025 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 AC009220.3-201ENST00000604318 586 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC068276.1-201ENST00000605793 379 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC010857.1-201ENST00000606398 594 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AL022394.1-201ENST00000606979 292 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC072046.2-201ENST00000618366 268 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AL353662.3-201ENST00000625131 237 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.18□□□□□ -1.42
RTP1P59025 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.18□□□□□ -1.42
RTP1P59025 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.18□□□□□ -1.42
RTP1P59025 AC020656.2-201ENST00000613291 5309 ntBASIC6.18□□□□□ -1.42
RTP1P59025 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.18□□□□□ -1.42
RTP1P59025 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTP1P59025 OR4F13P-202ENST00000560066 2054 ntBASIC6.18□□□□□ -1.42
RTP1P59025 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
RTP1P59025 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.17□□□□□ -1.42
RTP1P59025 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTP1P59025 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTP1P59025 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTP1P59025 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RTP1P59025 AC012618.3-205ENST00000637896 1496 ntBASIC6.17□□□□□ -1.42
RTP1P59025 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTP1P59025 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTP1P59025 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTP1P59025 AC109446.4-201ENST00000623235 2755 ntBASIC6.17□□□□□ -1.42
RTP1P59025 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms