Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TRAV11-201ENST00000539512 339 ntBASIC4.05□□□□□ -1.76
VSX2P58304 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.05□□□□□ -1.76
VSX2P58304 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.05□□□□□ -1.76
VSX2P58304 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX2P58304 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.05□□□□□ -1.76
VSX2P58304 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX2P58304 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX2P58304 MTND2P13-201ENST00000577438 1039 ntBASIC4.05□□□□□ -1.76
VSX2P58304 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX2P58304 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.05□□□□□ -1.76
VSX2P58304 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
VSX2P58304 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VSX2P58304 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX2P58304 AC107905.1-201ENST00000616204 426 ntBASIC4.05□□□□□ -1.76
VSX2P58304 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VSX2P58304 AC019278.1-201ENST00000623516 479 ntBASIC4.05□□□□□ -1.76
VSX2P58304 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VSX2P58304 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
VSX2P58304 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VSX2P58304 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.05□□□□□ -1.76
VSX2P58304 AC007390.2-201ENST00000606229 3803 ntBASIC4.05□□□□□ -1.76
VSX2P58304 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VSX2P58304 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VSX2P58304 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.04□□□□□ -1.76
VSX2P58304 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.04□□□□□ -1.76
VSX2P58304 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.04□□□□□ -1.76
VSX2P58304 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
VSX2P58304 AP000756.2-201ENST00000624168 2567 ntBASIC4.04□□□□□ -1.76
VSX2P58304 AC067945.1-201ENST00000342609 618 ntBASIC4.04□□□□□ -1.76
VSX2P58304 MIR365B-201ENST00000362317 111 ntBASIC4.04□□□□□ -1.76
VSX2P58304 RHOT1P2-201ENST00000366423 333 ntBASIC4.04□□□□□ -1.76
VSX2P58304 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
VSX2P58304 SNORA70C-201ENST00000384538 135 ntBASIC4.04□□□□□ -1.76
VSX2P58304 MIR513A2-201ENST00000385249 127 ntBASIC4.04□□□□□ -1.76
VSX2P58304 MT-RNR1-201ENST00000389680 954 ntBASIC4.04□□□□□ -1.76
VSX2P58304 RNA5SP105-201ENST00000391123 113 ntBASIC4.04□□□□□ -1.76
VSX2P58304 RN7SKP182-201ENST00000410772 298 ntBASIC4.04□□□□□ -1.76
VSX2P58304 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.04□□□□□ -1.76
VSX2P58304 VDAC1P6-201ENST00000430062 855 ntBASIC4.04□□□□□ -1.76
VSX2P58304 BTF3P10-201ENST00000433415 495 ntBASIC4.04□□□□□ -1.76
VSX2P58304 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.04□□□□□ -1.76
VSX2P58304 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.04□□□□□ -1.76
VSX2P58304 RAB28P3-201ENST00000448325 597 ntBASIC4.04□□□□□ -1.76
VSX2P58304 AF213884.1-201ENST00000488102 463 ntBASIC4.04□□□□□ -1.76
VSX2P58304 RPS6P4-201ENST00000494693 758 ntBASIC4.04□□□□□ -1.76
VSX2P58304 AC104164.2-201ENST00000496953 495 ntBASIC4.04□□□□□ -1.76
VSX2P58304 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.04□□□□□ -1.76
VSX2P58304 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.04□□□□□ -1.76
VSX2P58304 VTA1P2-201ENST00000520205 911 ntBASIC4.04□□□□□ -1.76
VSX2P58304 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VSX2P58304 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.04□□□□□ -1.76
VSX2P58304 AC069240.1-201ENST00000548774 375 ntBASIC4.04□□□□□ -1.76
VSX2P58304 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.04□□□□□ -1.76
VSX2P58304 AC090948.2-201ENST00000607363 564 ntBASIC4.04□□□□□ -1.76
VSX2P58304 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VSX2P58304 MIR8059-201ENST00000620427 81 ntBASIC4.04□□□□□ -1.76
VSX2P58304 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.04□□□□□ -1.76
VSX2P58304 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VSX2P58304 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
VSX2P58304 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.04□□□□□ -1.76
VSX2P58304 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VSX2P58304 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VSX2P58304 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VSX2P58304 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VSX2P58304 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.04□□□□□ -1.76
VSX2P58304 MFSD8-220ENST00000641243 1422 ntBASIC4.04□□□□□ -1.76
VSX2P58304 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.03□□□□□ -1.76
VSX2P58304 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.03□□□□□ -1.76
VSX2P58304 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VSX2P58304 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 RPS26P8-201ENST00000393490 348 ntBASIC4.03□□□□□ -1.76
VSX2P58304 RNA5SP104-201ENST00000410989 118 ntBASIC4.03□□□□□ -1.76
VSX2P58304 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.03□□□□□ -1.76
VSX2P58304 RBMY1KP-201ENST00000423480 476 ntBASIC4.03□□□□□ -1.76
VSX2P58304 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.03□□□□□ -1.76
VSX2P58304 AC004975.1-201ENST00000428733 208 ntBASIC4.03□□□□□ -1.76
VSX2P58304 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.03□□□□□ -1.76
VSX2P58304 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.03□□□□□ -1.76
VSX2P58304 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 HMGB3P10-201ENST00000434734 572 ntBASIC4.03□□□□□ -1.76
VSX2P58304 RPL23AP46-201ENST00000438548 490 ntBASIC4.03□□□□□ -1.76
VSX2P58304 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.03□□□□□ -1.76
VSX2P58304 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 RPL7P19-201ENST00000469948 618 ntBASIC4.03□□□□□ -1.76
VSX2P58304 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
VSX2P58304 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 AC091917.2-201ENST00000505002 744 ntBASIC4.03□□□□□ -1.76
VSX2P58304 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VSX2P58304 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.03□□□□□ -1.76
VSX2P58304 snoU109.6-201ENST00000516831 118 ntBASIC4.03□□□□□ -1.76
VSX2P58304 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.03□□□□□ -1.76
VSX2P58304 AC105233.3-201ENST00000531125 744 ntBASIC4.03□□□□□ -1.76
VSX2P58304 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.03□□□□□ -1.76
VSX2P58304 AC068446.3-201ENST00000555285 382 ntBASIC4.03□□□□□ -1.76
VSX2P58304 AC025884.1-201ENST00000556034 378 ntBASIC4.03□□□□□ -1.76
VSX2P58304 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms