Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH12P55289 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH12P55289 MTND4P31-201ENST00000425607 1343 ntBASIC4.58□□□□□ -1.68
CDH12P55289 FAM133CP-201ENST00000332869 704 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AC093719.1-202ENST00000392735 373 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AL592291.1-201ENST00000403830 352 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AL512422.1-201ENST00000407033 553 ntBASIC4.58□□□□□ -1.68
CDH12P55289 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 EIF4HP2-201ENST00000424380 563 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 AC092162.1-201ENST00000432828 434 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 MYO5BP2-201ENST00000449815 1277 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AC234781.3-201ENST00000452540 973 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH12P55289 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 AC011979.1-201ENST00000472300 483 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AC090114.3-201ENST00000479267 829 ntBASIC4.58□□□□□ -1.68
CDH12P55289 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 Y_RNA.688-201ENST00000516565 95 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH12P55289 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 AP000926.4-201ENST00000527351 454 ntBASIC4.58□□□□□ -1.68
CDH12P55289 MTND2P26-201ENST00000528255 1029 ntBASIC4.58□□□□□ -1.68
CDH12P55289 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH12P55289 MIR4666A-201ENST00000580160 79 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 VN1R88P-201ENST00000596787 292 ntBASIC4.58□□□□□ -1.68
CDH12P55289 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.58□□□□□ -1.68
CDH12P55289 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.58□□□□□ -1.68
CDH12P55289 Z94722.1-201ENST00000604328 474 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 AC099676.1-201ENST00000608886 657 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AC100847.1-201ENST00000611316 481 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AL450489.1-201ENST00000612071 468 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AC067852.7-201ENST00000623270 535 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AP000676.3-201ENST00000623299 569 ntBASIC4.58□□□□□ -1.68
CDH12P55289 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH12P55289 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH12P55289 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH12P55289 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH12P55289 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH12P55289 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH12P55289 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CDH12P55289 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH12P55289 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 DDX18P4-201ENST00000511690 1966 ntBASIC4.57□□□□□ -1.68
CDH12P55289 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
CDH12P55289 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 AC008549.2-201ENST00000333482 706 ntBASIC4.57□□□□□ -1.68
CDH12P55289 RNU6-225P-201ENST00000384613 103 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AP000580.1-201ENST00000404439 358 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 GAPDHP49-201ENST00000421421 961 ntBASIC4.57□□□□□ -1.68
CDH12P55289 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AC012519.1-201ENST00000424588 610 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH12P55289 FABP7P2-201ENST00000429946 379 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH12P55289 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH12P55289 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH12P55289 AC092647.2-201ENST00000452998 253 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AC108751.2-201ENST00000469993 231 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH12P55289 RN7SL101P-201ENST00000496350 279 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH12P55289 RNU6-1129P-201ENST00000515964 104 ntBASIC4.57□□□□□ -1.68
CDH12P55289 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.57□□□□□ -1.68
CDH12P55289 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH12P55289 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH12P55289 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 PDCL2P2-201ENST00000533651 189 ntBASIC4.57□□□□□ -1.68
CDH12P55289 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH12P55289 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH12P55289 AC040904.1-201ENST00000590850 223 ntBASIC4.57□□□□□ -1.68
CDH12P55289 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH12P55289 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH12P55289 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms