Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.52□□□□□ -1.37
USP11P51784 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.52□□□□□ -1.37
USP11P51784 RPL7P31-201ENST00000450192 724 ntBASIC6.52□□□□□ -1.37
USP11P51784 BX322784.1-201ENST00000455793 1077 ntBASIC6.52□□□□□ -1.37
USP11P51784 RPS23P6-201ENST00000466136 431 ntBASIC6.52□□□□□ -1.37
USP11P51784 PPIAP19-201ENST00000486414 492 ntBASIC6.52□□□□□ -1.37
USP11P51784 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.52□□□□□ -1.37
USP11P51784 RFPL4AP3-201ENST00000515267 345 ntBASIC6.52□□□□□ -1.37
USP11P51784 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 RNU6-1225P-201ENST00000516336 65 ntBASIC6.52□□□□□ -1.37
USP11P51784 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.52□□□□□ -1.37
USP11P51784 AK6P1-201ENST00000540219 478 ntBASIC6.52□□□□□ -1.37
USP11P51784 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.52□□□□□ -1.37
USP11P51784 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.52□□□□□ -1.37
USP11P51784 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.52□□□□□ -1.37
USP11P51784 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.52□□□□□ -1.37
USP11P51784 AC008752.3-201ENST00000588113 712 ntBASIC6.52□□□□□ -1.37
USP11P51784 AC233280.2-201ENST00000603917 1070 ntBASIC6.52□□□□□ -1.37
USP11P51784 AL121655.1-201ENST00000605811 308 ntBASIC6.52□□□□□ -1.37
USP11P51784 AC093388.1-201ENST00000609166 430 ntBASIC6.52□□□□□ -1.37
USP11P51784 MIR6862-1-201ENST00000613016 70 ntBASIC6.52□□□□□ -1.37
USP11P51784 MIR6862-2-201ENST00000614755 70 ntBASIC6.52□□□□□ -1.37
USP11P51784 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.52□□□□□ -1.37
USP11P51784 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.52□□□□□ -1.37
USP11P51784 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 AC127024.6-201ENST00000621598 424 ntBASIC6.52□□□□□ -1.37
USP11P51784 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 AC112487.2-201ENST00000637950 304 ntBASIC6.52□□□□□ -1.37
USP11P51784 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
USP11P51784 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
USP11P51784 SEC63P2-201ENST00000503863 1939 ntBASIC6.52□□□□□ -1.37
USP11P51784 AC007842.1-201ENST00000597336 2039 ntBASIC6.52□□□□□ -1.37
USP11P51784 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
USP11P51784 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
USP11P51784 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USP11P51784 AC093909.5-201ENST00000621839 1799 ntBASIC6.52□□□□□ -1.37
USP11P51784 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
USP11P51784 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USP11P51784 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.51□□□□□ -1.37
USP11P51784 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
USP11P51784 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.51□□□□□ -1.37
USP11P51784 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USP11P51784 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USP11P51784 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
USP11P51784 RNU4-73P-201ENST00000363164 141 ntBASIC6.51□□□□□ -1.37
USP11P51784 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
USP11P51784 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
USP11P51784 RNA5SP91-201ENST00000390902 119 ntBASIC6.51□□□□□ -1.37
USP11P51784 U3.23-201ENST00000391132 200 ntBASIC6.51□□□□□ -1.37
USP11P51784 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USP11P51784 RPL11P3-201ENST00000395256 523 ntBASIC6.51□□□□□ -1.37
USP11P51784 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.51□□□□□ -1.37
USP11P51784 CALM2P3-201ENST00000400429 449 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.51□□□□□ -1.37
USP11P51784 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 RPA2P2-201ENST00000419698 796 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.51□□□□□ -1.37
USP11P51784 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 AC092647.1-201ENST00000420654 287 ntBASIC6.51□□□□□ -1.37
USP11P51784 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 AC007742.1-201ENST00000425789 329 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC073464.1-201ENST00000429823 534 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 AC104850.1-201ENST00000435940 476 ntBASIC6.51□□□□□ -1.37
USP11P51784 ELOCP26-201ENST00000436067 329 ntBASIC6.51□□□□□ -1.37
USP11P51784 YWHAZP2-201ENST00000440317 728 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.51□□□□□ -1.37
USP11P51784 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 AC239367.2-201ENST00000447309 705 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.51□□□□□ -1.37
USP11P51784 RPS20P24-201ENST00000457473 361 ntBASIC6.51□□□□□ -1.37
USP11P51784 RPS23P2-201ENST00000463671 415 ntBASIC6.51□□□□□ -1.37
USP11P51784 GAPDHP39-201ENST00000481866 979 ntBASIC6.51□□□□□ -1.37
USP11P51784 RPL7P24-201ENST00000493052 752 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC019235.1-201ENST00000503847 207 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 RN7SKP31-201ENST00000516354 278 ntBASIC6.51□□□□□ -1.37
USP11P51784 AC008802.1-201ENST00000519121 791 ntBASIC6.51□□□□□ -1.37
USP11P51784 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.51□□□□□ -1.37
USP11P51784 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 IGBP1P1-201ENST00000554337 1009 ntBASIC6.51□□□□□ -1.37
USP11P51784 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 NIFKP8-201ENST00000560500 874 ntBASIC6.51□□□□□ -1.37
USP11P51784 MIR4637-201ENST00000582405 84 ntBASIC6.51□□□□□ -1.37
USP11P51784 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.51□□□□□ -1.37
USP11P51784 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms